Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01019 ATGCTTAGTACTGAAGGTGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGCCACAGAGGTATCCCTTGCAAGGTTGCCAATGGCCGCAAATGGAGCCCTGAAATCCGCAGAACAAGCAGTTTCTCTTGCTTATCCGGTGCTGCCTTAAGTGCAAACGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGAGAAGAAATCCTTCCGAGTTTGGACTCTCCTAATTCCTTCCGGCGGGTACCCTCTTCTCCAAGTCTTGCAAAGTTGGACATGCTATCGTCTTCTCTCCATAGTACTTGGTCAAACCTAAGTTGCAGCCCATCCAGTCCAAGTAATATGCTTGAATATGACTTTTGTTCATTAAAATCCATGAGTGCTCCTTCTAGAGGTGAATGTTTTCTTAATGCTACGGAAGTGCAAGTAGCCGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAACGGGTGGCTTTTCTGCGGAATTTATGATGGTTTTAATGGGAGAGATGCAGCGGACTTTCTGGCTTGTACTCTTTATGACTCTATTGTGTCTTATTTAAACACAATAGACTGGGATTCGGAACCAAATTCCACCAGTGCTTCTGACAATGACGATTTGGACGATAGTCTAATTCTTCACGAGCATCAATCTCCAAGATTTAAGGGAAACAATTATCCCAGTAGTCCACCTGCCAATTCAGAGGCAATAAGTAAATCATTTTCCCACGTGGTACTTGATAGCCTCAAACATGTTCTTAATCAGGTTGAAAATGACTTCTTGTACATGGTCGAGCAGGAAATGGAGGAACGCCCCGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAACGATTTGTGTACGCTCAATCTAGGCGACAGCAGAGCAGTGCTGGCAACGTGCAGTGCAGGTAACGGAATGACTGGAAACGAGAGATTGAAATCTATTCAGCTTACGGATAGTCATAATGTTGATAATGAAGCTGAAAGAGCTCAACTTCTTGCCAATCATCCTGATGATCCTAAGACCATCGTAGCAGGGAAAGTGAAAGGAAAACTGAAGGTTACACGTGCTTTCGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTAATGGGAATCCTTCGAGTTAGCGATCTTAAAAGCCCTCCATATGTTTCGACAGATCCATCACTGAATGTGCATAAAATCTCTACTTCTGATCAGTTTGTTATAGTTGGGAGTGATGGTTTATTTGACTTCTTTAGCAATGATGAAGCAGTGAATCTTGTTGAGTCTTACATCCTGAGCAATCCTTATGGTGATCCAGCCAAATTTCTCATTGAGAAACTAGTAGCAAGAGCAGCTGATTCTGCAGGTTTCAGCACGGAGGAGTTATTGAATATTCCGGCTGGGAGGAGGAGGAAGTATCACGATGATGTAACCGTAATTGTGATAATCCTTGGGATGAATAAACGGACTACAAAGGCATCGACTTGCATCTAA 1527 0.4244 MLSTEGELKISFGYQCNSHRGIPCKVANGRKWSPEIRRTSSFSCLSGAALSANATLANTNICNGVIGEEILPSLDSPNSFRRVPSSPSLAKLDMLSSSLHSTWSNLSCSPSSPSNMLEYDFCSLKSMSAPSRGECFLNATEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLACTLYDSIVSYLNTIDWDSEPNSTSASDNDDLDDSLILHEHQSPRFKGNNYPSSPPANSEAISKSFSHVVLDSLKHVLNQVENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLCTLNLGDSRAVLATCSAGNGMTGNERLKSIQLTDSHNVDNEAERAQLLANHPDDPKTIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVSDLKSPPYVSTDPSLNVHKISTSDQFVIVGSDGLFDFFSNDEAVNLVESYILSNPYGDPAKFLIEKLVARAADSAGFSTEELLNIPAGRRRKYHDDVTVIVIILGMNKRTTKASTCI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01019 508 CDD PP2Cc 149 495 IPR001932 -
Car01g01019 508 SUPERFAMILY PP2C-like 149 496 IPR036457 -
Car01g01019 508 SMART PP2C_4 135 493 IPR001932 -
Car01g01019 508 PANTHER PROTEIN PHOSPHATASE 2C 2 507 IPR015655 GO:0004722|GO:0006470
Car01g01019 508 Gene3D - 113 504 IPR036457 -
Car01g01019 508 Pfam Protein phosphatase 2C 247 462 IPR001932 -
Car01g01019 508 ProSiteProfiles PPM-type phosphatase domain profile. 136 495 IPR001932 -
Car01g01019 508 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01019 Car-Chr1 9663508 9666347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01019 6 508 PP2C-type Phosphatase Gene Family AT3G16560 62.868 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01019 - - gmx:100808304 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01019 01 9663508 9666347 Car01g01019 01 9663508 9666347 ECH
Car07g00575 07 5001614 5003840 Car01g01019 01 9663508 9666347 PCT