Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01015 ATGGTAGTGAAGAATGGTGGAATAGATAGGAGGTTTGGAGAACAAAAACGCGATAGATGCATAGAGAGATCACAGCACAGTTCTCAACACCAGATTGCTCTCGATATTAATCTTCCACATGTTCAGATATTCAGATTAAGTCCTGTTCAATCGGTTTGCATGGTAGAAGGCTCTGATGCTGGCAAACAGACATCTTATTCCAGGGGAGTTGCTATACAGTTTAGAAATGAGGAAGAAAGTGAGGCCTTCCATTGTATATTCCAACAATGGAAGAAGGAACTCAATGTTCAAGGAAGGAACATACCAAAGGGAACTAATGTAATGACTTCAAAAAGCAAATTTGATGAGAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCATCAGCAAAATATGATGCAGGACTATGTGAGGACAGGGACATATTATGCTGCTGTTATGGAGAATCGCACTGATTTCTTTGGTCGTGTAGTGGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCAGGTGCAAAACATGTTTATGCAGTAGAAGCATCTGAAATGGCAGAATACGCACGCAAACTTATAGCTGGGAACCCATTACTGGGTCAACGAATCACAGTCATCAAAGGCAGAGTAGAGGATGTTGTATTGCCAGAGAAAGCAGATATTCTGATATCCGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTTATTGCCAGGGATAGGTTCCTTACCCCTAATGGCAAAATGTTTCCTACATCGGGAAGGATTCACATGGCACCTTTCAGTGATGAATATTTGTTTACGGAAATTGCTAATAAGGGGCTGTTCTGGCAGCAACAAAACTATTTTGGGGTTGATTTGACGCCCTTACACTGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTTGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTCCTCCTATTTTCCATGTGATGGACTTTACCAAAATAAAGGAAGAAGAGCTTTATGAAATTGACATTCCTCTCAGATTTATAGCTGCAGTGGGTGCCCGAGTACATGGTTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGAAAAGGTGGCTTACCACTGCCCCTGGTTCACCGATAACTCATTGGTATCAGATACGCTGCGTTCTCTCCGAACCCATATATGTCATGGCAGGGCAAGAAATTACTGGCAGGCTGCACTTGATTGCCCACAGTGCACAGAGTTACACAATCTATTTAACATTGTCAGCTAAAATGTGGGGGCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATTTGAAAGAACCATACTATAGAATGTCTCAACCACAAGCTTATCCAACAACCCAAGATCAGCAACCTCATCCATTTTTACAGACACAGTTTCTTTGGCAGGATGTAAAGATCCAATCTCAGGATATGGATGACACAGTGATAATGCAATAG 1518 0.4157 MVVKNGGIDRRFGEQKRDRCIERSQHSSQHQIALDINLPHVQIFRLSPVQSVCMVEGSDAGKQTSYSRGVAIQFRNEEESEAFHCIFQQWKKELNVQGRNIPKGTNVMTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMMQDYVRTGTYYAAVMENRTDFFGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPLLGQRITVIKGRVEDVVLPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTSGRIHMAPFSDEYLFTEIANKGLFWQQQNYFGVDLTPLHWTAFQGYFSQPVVDAFDPRLLIAPPIFHVMDFTKIKEEELYEIDIPLRFIAAVGARVHGLACWFDVLFNGSTVKRWLTTAPGSPITHWYQIRCVLSEPIYVMAGQEITGRLHLIAHSAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPTTQDQQPHPFLQTQFLWQDVKIQSQDMDDTVIMQ 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01015 505 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 119 434 IPR025799 GO:0016274|GO:0018216
Car01g01015 505 Pfam Ribosomal protein L11 methyltransferase (PrmA) 162 235 - -
Car01g01015 505 Gene3D - 268 476 - -
Car01g01015 505 Gene3D Vaccinia Virus protein VP39 104 266 IPR029063 -
Car01g01015 505 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 440 IPR029063 -
Car01g01015 505 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 33 474 - -
Car01g01015 505 CDD AdoMet_MTases 165 265 - -
Car01g01015 505 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 33 474 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01015 Car-Chr1 9639757 9648453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01015 126 416 C2H2 Transcription Factor Family AT3G12270 33.010 2.03e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01015 K05931 - gmx:100818828 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01015 01 9639757 9648453 Car01g01015 01 9639757 9648453 ECH
Car07g00567 07 4944695 4950387 Car01g01015 01 9639757 9648453 PCT