Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01007 ATGGAAGGTAACAAAGACGAAGCATTAAGATGCATCAAAATCGCAGAAGACGCAATCGCTTCAGGTAACAAAGGTCGCGCTCTCAAATTCATCAAAATCGCTCAGCGTCTCAACCGCGATTTACCGCTCGATTCATTGTTTGCCATGTGCGAACGACTCGATTCTCAGTCCTCCGCATCTTCTTCCGGAACAAACTCCGGAGCCGGTACATCGCCGCCGAGTGATAATCCGGCGAGAATTGATGAGAGGAATTATACGACAGAGAATGTTAAGTTGATTAGTGAAATTAAAGGGAAACAGGATTACTATTCGATTTTAGGGTTAGAGAAGAGTTGTTCTGTTGAAGAGATTAGGAAGGCTTATAGGAAACTATCTTTGAAGGTTCATCCTGATAAGAATAAAGCGCCGGGTTCTGAAGACGCGTTTAAGAAAGTTTCTAAGGCTTTTAAGTGTTTGAGTGATGATGGTTCTAGAAGGGAGTATGATCAAGGAGGGTTAGTTGATgaatttgattggaattataatcagaataataattTTAGGCGGAGGAGGAGAAGAGCTACTAATGCTCGTGATATTTTCGAAGATGAGTTTGACCCTGATGAGATTTTTAGAGCTTTCTTTGGACAGTCTGATGTGTTTGGGAGGAGAAATCACATTTATAGGACTAGGGGAGGCGGCGGTGGTGGTGGGGTGGGTAGTCATCATCAGAGGCATGAGTTTCAGGGTGGAGGAGGTCATCATCTTATGCTGCTGATTCAGCTTCTGCCATTGTTGATTATTGTGCTACTTGCTTACTTGCCCTTTTCAGATCCTGTATATTCCTTGCAAAAGAATCAGTCCTACCAGATTCCTAAGATCACTGAGGATTATGGGGTTCAGTATTTTGTGAAATCTCAGGCGTTTGATGATACTTATCCGATTGGAAGTTCAGCTCGTGAGACCATTGAGCATAATGTTGTGAAGGATTATAGGAATATGCTTCGTCGTTATTGTCAAATGGAGATTCAGAGGCGTACTTGGAATAGAAATCTACCTGTTCCTCACTGTGACAAGCTACAAAACTTTGGCGTTGTAGCCTGA 1083 0.4183 MEGNKDEALRCIKIAEDAIASGNKGRALKFIKIAQRLNRDLPLDSLFAMCERLDSQSSASSSGTNSGAGTSPPSDNPARIDERNYTTENVKLISEIKGKQDYYSILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRREYDQGGLVDEFDWNYNQNNNFRRRRRRATNARDIFEDEFDPDEIFRAFFGQSDVFGRRNHIYRTRGGGGGGGVGSHHQRHEFQGGGGHHLMLLIQLLPLLIIVLLAYLPFSDPVYSLQKNQSYQIPKITEDYGVQYFVKSQAFDDTYPIGSSARETIEHNVVKDYRNMLRRYCQMEIQRRTWNRNLPVPHCDKLQNFGVVA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01007 360 MobiDBLite consensus disorder prediction 56 84 - -
Car01g01007 360 PRINTS DnaJ domain signature 103 121 IPR001623 -
Car01g01007 360 PRINTS DnaJ domain signature 121 136 IPR001623 -
Car01g01007 360 PRINTS DnaJ domain signature 137 157 IPR001623 -
Car01g01007 360 Pfam DnaJ domain 101 162 IPR001623 -
Car01g01007 360 Gene3D DnaJ domain 98 219 IPR036869 -
Car01g01007 360 PANTHER AT29763P-RELATED 1 358 - -
Car01g01007 360 ProSiteProfiles dnaJ domain profile. 101 165 IPR001623 -
Car01g01007 360 PANTHER CHAPERONE PROTEIN DNAJ 49 1 358 - -
Car01g01007 360 MobiDBLite consensus disorder prediction 56 73 - -
Car01g01007 360 SUPERFAMILY Chaperone J-domain 97 168 IPR036869 -
Car01g01007 360 SMART dnaj_3 100 157 IPR001623 -
Car01g01007 360 CDD DnaJ 101 154 IPR001623 -
Car01g01007 360 Pfam Domain of unknown function (DUF1977) 270 340 IPR015399 -
Car01g01007 360 Coils Coil 177 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01007 Car-Chr1 9541239 9545105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01007 96 162 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.620 1.21e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01007 K09518 - gmx:100820432 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01007 01 9541239 9545105 Car01g01007 01 9541239 9545105 ECH