Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00991 ATGGGACGACCTCGTGATAATGATGTTAATGGTGGTGGTGACCAAAGGAAAAGATTTACACTTCTTGGTGTCTCTTCAGTCCTTCTTGTAGCAATGGTTGGTGCTGTTGCTGTTGGTTTAACAAGTAAAGGTGACACAAATTCAGAACAAGGACAAAATGGTCAAATTTCCAGCACACAAAGAAATGTTGAAATAATTTGTGAATCAACACAGTACCAAGAAACATGTCACAAAAGTCTTGATAAAGCATCAAATGAAACATCTGATATGAAAGAGCTTATAAAAGCTGCTTTTAATGCAACAGCAGAGGAGTTAATAAAACAAATACATAACACAACACTTTATGATGAACTTGCAAAAGACAACATGACAAAACAAGCAATGAATATTTGTAATGAGGTTTTGGATTATGCTGTTGATGGTATTCATAGATCTATTGACACAATGGATAAATATGATTTCAATAAGTTGAGTGAATATGCTTATGATCTTAAGGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTGGATGGTTTTGAGAATACAACAACTAAAGCTGGTGAAATTATGGCTAAGGCTTTGAACACTTCTTTGGAATTAAGTAGTAATTCTTTGGACATTATAAATGCTGTTTCTAGCTTACTTAAGGATGCTGGTGAGAATAATGTTAATGTAAATCTTAATAGGAAGCTTTTGTCTAACGATGGTTTTCCTTCTTGGGTCAGTGAAGGACAAAGACATATTTTGATGGAAGGAAATTTTAAGCCAAATGCTGTTGTGGCTCAAGATGGTAGTGGACAATTTAAGACATTAAGTGAAGCTCTTTTGACAGTTCCTTCTTATAATGCAGAACCTTTTGTGATTTATGTTAAGGCTGGTATTTATAATGAGAATGTTAATGTGCTTAAGGAAATGACTCATGTTACTATCATTGGTGATGGTCCTACAAAGACTAGATTCACTGCTAGCCTTAACTATGTTGATGGTGTCCAAACTTACAACACTGCAACTTTTGGTGTAAATGGTGCAAACTTCATGGCAAAGGATGTTGGATTTGAGAACACAGCAGGAGCAGAGAAACATCAAGCAGTAGCACTACGAGTAACAGCAGATCAAGCAGTATTTTACAACTGTCAAATGGATGGTTTCCAAGACACTCTCTACACACAATCACAACGTCAATTCTACCGTGATTGCAGCGTCTCAGGAACGATCGATTTCATCTTTGGAGACGCATTCGGAGTATTCCAAAACTGTAAACTAATTGTTAGAAAACCATCAGAAGACCAACAATGTTTAGTAACAGCTGGAGGAAGAATAAAAGCTGACAGTGCAAGTGGTCTTATTTTCCAAAACTGTCACTTCACAGGTGAAGCAGAATTAGCAGTCATGAGACCAAAAATATCTTACCTAGGAAGACCATGGAAGCCATATTCAAAAGTTGTAATTATGGATTCTCAAATTGATGACATATTTGTACCAGAAGGTTACATGCCATGGGCTGGAAGTGCATTTGAAGAAACATGTATTTATTATGAATACAATAACAAAGGACCAGGTGCAGATACATCATCAAGAGTTAAATGGGTTGGTGTTAAAACCATATCTTCTGATGAAGCTGTTGATTATTACCCTGGTAGATTCTTTGAAATTGTTAATTCAACTCAACGTGATTCTTGGATTGTTGATTCTGGAATACCTTATTCTCTTGGGCCTATGGATGCTACTAATCCAGCTGGTCAAGGTCATCATGGATTAAGTGGTATTGGTGCCATTAATAAAGTTAAAGTTAGGAAAAATATTCGTGATCATGCCTTTGGCAGACAACACCCTTCACGTACTCACGAGATTTTTACTCTCATATGA 1875 0.3627 MGRPRDNDVNGGGDQRKRFTLLGVSSVLLVAMVGAVAVGLTSKGDTNSEQGQNGQISSTQRNVEIICESTQYQETCHKSLDKASNETSDMKELIKAAFNATAEELIKQIHNTTLYDELAKDNMTKQAMNICNEVLDYAVDGIHRSIDTMDKYDFNKLSEYAYDLKVWLTGTLSHQQTCLDGFENTTTKAGEIMAKALNTSLELSSNSLDIINAVSSLLKDAGENNVNVNLNRKLLSNDGFPSWVSEGQRHILMEGNFKPNAVVAQDGSGQFKTLSEALLTVPSYNAEPFVIYVKAGIYNENVNVLKEMTHVTIIGDGPTKTRFTASLNYVDGVQTYNTATFGVNGANFMAKDVGFENTAGAEKHQAVALRVTADQAVFYNCQMDGFQDTLYTQSQRQFYRDCSVSGTIDFIFGDAFGVFQNCKLIVRKPSEDQQCLVTAGGRIKADSASGLIFQNCHFTGEAELAVMRPKISYLGRPWKPYSKVVIMDSQIDDIFVPEGYMPWAGSAFEETCIYYEYNNKGPGADTSSRVKWVGVKTISSDEAVDYYPGRFFEIVNSTQRDSWIVDSGIPYSLGPMDATNPAGQGHHGLSGIGAINKVKVRKNIRDHAFGRQHPSRTHEIFTLI 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00991 624 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 215 IPR035513 -
Car01g00991 624 Gene3D - 257 576 IPR012334 -
Car01g00991 624 CDD PMEI-like_3 66 216 - -
Car01g00991 624 SUPERFAMILY Pectin lyase-like 258 552 IPR011050 -
Car01g00991 624 TIGRFAM PME_inhib: pectinesterase inhibitor domain 58 213 IPR006501 GO:0004857
Car01g00991 624 ProSitePatterns Pectinesterase signature 1. 285 304 IPR018040 -
Car01g00991 624 Pfam Pectinesterase 260 551 IPR000070 GO:0030599|GO:0042545
Car01g00991 624 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 214 IPR035513 -
Car01g00991 624 PANTHER PECTINESTERASE 12 579 - -
Car01g00991 624 SMART PMEI_2 58 210 IPR006501 GO:0004857
Car01g00991 624 ProSitePatterns Pectinesterase signature 2. 404 413 IPR033131 -
Car01g00991 624 Pfam Plant invertase/pectin methylesterase inhibitor 63 210 IPR006501 GO:0004857
Car01g00991 624 PANTHER PECTINESTERASE 12 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00991 Car-Chr1 9361586 9363772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00991 12 571 Carbohydrate Esterase AT5G49180 47.368 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00991 K01051 - gmx:100784682 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00991 01 9361586 9363772 Car01g00991 01 9361586 9363772 ECH
Car07g00549 07 4823710 4825957 Car01g00991 01 9361586 9363772 PCT