Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00986 ATGGCGACAGAGAAGTTAATGTCCAGCGGTGGTCCCCGCTACGTTCAAATGAGATCCTCTCCGCCGTCATCTCCTCCCACGGCGGACATCTCATCACTCCCATCCTTTCGTCATGGCATCGAAACCTGTCGGATTTTCGATGAATTGCCTAAAGCCTCCATCGTCTCTGTCTCTCGTCCTGACGCTAGTGACATCAGCCCTATGCAACTCTCTTACACCATTCAGGTTCAGTATAAACAGTTCAAGTGGGAGCTAGTGAAGAAAGCTAGTCAAGTATTTATTTTGCATTTTGCATTAAAAAAGCGTGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAAAACACTACTATGGAACAAGTTGAAGATGAAGCTGATGATGAAACAGTTCCTTTACAAACTGATGAAAGTGCTAAAAACAGAGACGTTCCATCTAGTGCTGCTCTACCAATTATACGGCCAGCTTTAGGAAGACAACAATCTATTGCGGACAGGGCAAAAAGTGCAATGCAAGGGTATCTGAATCACTTTTTGGGAAATATTAGTATTGTTAATTCTCCTGAGGTTTGCAAGTTTTTGGAGGTGTCAATGTTATCTTTTTCACCTGAATATGGCCCTAAGCTGAAGGAAGAATCTGTGATGGTGAAGCATCTGCCTAAAATTAAAAAGGATGACGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTTAATTGTTGTAATGACAATTGGCAAAAGGTTTGGGCCGTACTAAAACCTGGATTCATGGCATTTCTGGCAGATCCTTTTGATTCACAACCCTTGGACATTATTGTTTTTGATGTACTTCCAGCCTCAGATGGCAATGGGGACGGTCGTCTATCGTTAGCGATTGAAATGAAGGAACGAAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAATCCGAAGTATTAGAATTAGAGTGAAAAGTAGTAGTAAAGTTAAAGGTTGGGTCGCTGCAATTAATGATGCTGGACTCAAGCCTCCTGAAGGATGGTGCCATCCTCATCGCTATGGCTCTTTTGCTCCTCCAAGAGGCTTAAATGAAGATGATAGTCAAGCACAGTGGTTTGTAGATGGGCAAGCAGCATTTGAGGTCATGGCTTCTTCAATTGAGGATGCCAAATCTGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTCAACACCCATGCTTCATCAAGGCTTGATAATCTGTTGGAAGCAAAAGCTAAGGAAGGCGTACAGATCTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAGAAAGCTTCTTAGCATCCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAGCTTGTCATTGTTGATAATCATATTTGCTTCATCGGAGGACTGGATTTGTGCTTTGGTCGATACGACTCACCTGAACATAAAGTTGGAGATGTTCCCCCTTTAATCTGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCTAATTCATGGGAAGATACAATGAAAGATGAACTGGAGCGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCTCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAATAAAGCTCCATATGAACAAACAATACCATTACTTATGCCTCAACATCATATGGTTATTCCTCATTACTTGGGAAGCAGTGAGATACCGATTGAAATCAAGAACACAGTCAATGGTAAAGTCCTCAAGAGGGAAGATTCATTTTCGTCATCTTCCCAGGACCAAGATATTCCTCTACTCCTGCCTCAGGAGCCGGGAGGGTTGAATGCTCCTGGAGGAGACCCAAAACCAAATGGGCGAATCTCCTTTTTACATCACCTTGACAAGCCAAGAAGGATCAGCAGTGGCCTTCCTTTTTCATTCCGAAGGGCGAAAATTGCAGCAGTTGGTCCGGATACACCAATGAAGGGCTTTGTTGATGATCTTGACTCTGAGCATTATCACGAGAAAATGCCTCATGATAGATTGGCTCACGTTGATTCACAAAATACAGATCTAGAATGGTGGGAATCACAAGAACGGGATGATCAGGGAGGTTTTGCTGATGAATCTGGACAAATTGGTCCTCGTGCTTCCTGCCGTTGTCAGGTTATTAGGAGCGTCAGTCAGTGGTCAGCTGGAACAAGCCAAACTGAAGAGAGCATCCACAGTGCTTATTGCTCTCTCATTGAGAAAGCTGAATACTTCATCTACATTGAGAACCAGTTTTTTATATCAGGTCTTTCTGGAGATGATATGATACGCAACCGTGTGTTAGAAGCTTTATTTCGACGGATTATGCGAGCTTATAATGACAAAAAATCTTTCAGAGTTATAGTCGTTATACCTCTCCTGCCTGGCTTCCAGGGGGGGCTTGATGATGGCGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGGCAGAAATCTATCTTACATAATCTTTATGATCTTCTTGGCTCAAGAGTACATGACTACATCTCTTTTTACGGACTGAGGAATTATGGTAGACTCTCCGATGGTGGTCCTGTAGCAACCAGCCAGGTGTACGTTCACAGTAAAATTATGATTGTTGATGATTGTATAAGTTTGATTGGATCTGCTAATATTAATGATAGGAGCTTACTTGGTTCCAGGGACTCTGAGATTGGTGTAGTTATAGAAGACAAAGAGTTGATTGATTCTTATATGGATGGAAAGCCTTGGAAGGCAGGGAAGTTTTCTTTGACTCTCCGATTATCATTATGGTCTGAACACTTAGGTCTCCCGGCAGGAGAGGTCAATCAAATAATGGACCCTGTTGTTGAGTCTACGTACAAGGACATTTGGATGACAATAGCAAAGACAAATACTGCAATTTATCAGGATGTCTTTTCCTGTGTGCCTAATGATTTGATACACACCAGACTTGCTTTCAGACAAAGTGTGGCTTTATGGAAAGAAAAAATCGGACACACTACCATTGATTTGGGAATAGCCCCAGAAAAACTAGAATCCTATCAGGATGGAGATATCAAGAACACTCATCCCTTGGAGAGATTAGCAACAGTAAAGGGTCATCTTGTTTCTTTTCCCTTGGAGTTCATGTGTCAAGAAAGTCTAAGACCTGCTTTCAATGAAGGTGAATACTATGCTGCTCAAGTTTTCCATTGA 3348 0.4241 MATEKLMSSGGPRYVQMRSSPPSSPPTADISSLPSFRHGIETCRIFDELPKASIVSVSRPDASDISPMQLSYTIQVQYKQFKWELVKKASQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGENTTMEQVEDEADDETVPLQTDESAKNRDVPSSAALPIIRPALGRQQSIADRAKSAMQGYLNHFLGNISIVNSPEVCKFLEVSMLSFSPEYGPKLKEESVMVKHLPKIKKDDDSRKCCLSDCFNCCNDNWQKVWAVLKPGFMAFLADPFDSQPLDIIVFDVLPASDGNGDGRLSLAIEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKGWVAAINDAGLKPPEGWCHPHRYGSFAPPRGLNEDDSQAQWFVDGQAAFEVMASSIEDAKSEIFICGWWLCPELYLRRPFNTHASSRLDNLLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSPEHKVGDVPPLIWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQTIPLLMPQHHMVIPHYLGSSEIPIEIKNTVNGKVLKREDSFSSSSQDQDIPLLLPQEPGGLNAPGGDPKPNGRISFLHHLDKPRRISSGLPFSFRRAKIAAVGPDTPMKGFVDDLDSEHYHEKMPHDRLAHVDSQNTDLEWWESQERDDQGGFADESGQIGPRASCRCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIENQFFISGLSGDDMIRNRVLEALFRRIMRAYNDKKSFRVIVVIPLLPGFQGGLDDGGAASVRAIMHWQYRTICRGQKSILHNLYDLLGSRVHDYISFYGLRNYGRLSDGGPVATSQVYVHSKIMIVDDCISLIGSANINDRSLLGSRDSEIGVVIEDKELIDSYMDGKPWKAGKFSLTLRLSLWSEHLGLPAGEVNQIMDPVVESTYKDIWMTIAKTNTAIYQDVFSCVPNDLIHTRLAFRQSVALWKEKIGHTTIDLGIAPEKLESYQDGDIKNTHPLERLATVKGHLVSFPLEFMCQESLRPAFNEGEYYAAQVFH 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00986 1115 Gene3D Endonuclease Chain A 365 602 - -
Car01g00986 1115 MobiDBLite consensus disorder prediction 1 30 - -
Car01g00986 1115 Gene3D - 234 344 IPR011993 -
Car01g00986 1115 SUPERFAMILY Phospholipase D/nuclease 342 600 - -
Car01g00986 1115 SUPERFAMILY Phospholipase D/nuclease 753 963 - -
Car01g00986 1115 CDD PH_PLD 196 343 - -
Car01g00986 1115 PANTHER PHOSPHOLIPASE 37 1112 - -
Car01g00986 1115 SUPERFAMILY PH domain-like 252 343 - -
Car01g00986 1115 MobiDBLite consensus disorder prediction 13 30 - -
Car01g00986 1115 Gene3D Endonuclease Chain A 718 972 - -
Car01g00986 1115 MobiDBLite consensus disorder prediction 131 152 - -
Car01g00986 1115 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 912 939 IPR001736 GO:0003824
Car01g00986 1115 MobiDBLite consensus disorder prediction 630 664 - -
Car01g00986 1115 Pfam PLD-like domain 785 961 IPR025202 -
Car01g00986 1115 CDD PLDc_vPLD1_2_yPLD_like_2 772 956 - -
Car01g00986 1115 PIRSF PLD_euk 48 613 IPR016555 GO:0004630|GO:0006654|GO:0048017
Car01g00986 1115 PIRSF PLD_euk 607 1115 IPR016555 GO:0004630|GO:0006654|GO:0048017
Car01g00986 1115 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 480 507 IPR001736 GO:0003824
Car01g00986 1115 PANTHER PHOSPHOLIPASE D 37 1112 IPR015679 -
Car01g00986 1115 CDD PLDc_vPLD1_2_yPLD_like_1 373 518 - -
Car01g00986 1115 Pfam Phospholipase D Active site motif 480 507 IPR001736 GO:0003824
Car01g00986 1115 SMART pld_4 912 939 IPR001736 GO:0003824
Car01g00986 1115 SMART pld_4 480 507 IPR001736 GO:0003824
Car01g00986 1115 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00986 Car-Chr1 9260059 9278421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00986 1 996 Phospholipase D Gene Family (Wang group) AT3G16785 72.079 0.0 1399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00986 K01115 - gmx:100780514 2017.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00986 01 9260059 9278421 Car01g00986 01 9260059 9278421 ECH