Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00982 ATGGGACAAGAATCAGATTACAAAACCCAGTTGGTATTAGATATATGCTCCATTTCCACCCGTTCAGTTCATTGTGTTCATACACTTTTTTCTAATGCACCTTTCATTGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGAAAGTACCATTCGTAAAAAATATCATAAACTTGCCTTGCAACTTCATCCAGATAAGAATAAACACCCCAAAGCTGAAATTGCATTCAAGCTTGTCTCTGAGGCATATACATGTCTATCTGATGCTGTAAAAAGAAAAGCTTTTAATTTAGAAAGAAACAAAAGCTTCTGCATTGAATGCAACAGAATTTCATATACATCAAACATTGTCACTACCAATTCAAATGGTTCAAGTTTCAAGGCATGGAACATTATAAGCAAATCAATATCTAGTAAAGTTAGAAGAAACATTAAGGATATGAGAGAAAAATTGAAGGAAGAAGCTAAGGTGATTGAGAATTGTTTGAGGAAAAATTCAGTGTCAAAGAAGGAATCTCCAATTTACAATCCATCAAAGAATCATTTACATGGAGGAAGGTGTCAACATAGAGTTGAGAGAGAAATTCCTGTTTTCAATCCATCAAATTACAAATACCAAAGTTACCCTCATTCTAGGGACAATGTTTACAAGAATTCTAAGACGTGTTGGTATTTGCAGACAGAAAAAATAGTGCAGAATGGTAACAAGGGAGGAGCTAAGTATGCATCTCCTGTTTTTGAGGTCAAGTCAAGTAGTGTAGACACAAGAAAATTTGCTTGTGTTCCATCAAAGTGTTAG 804 0.3483 MGQESDYKTQLVLDICSISTRSVHCVHTLFSNAPFIDWYCILGVEENAGESTIRKKYHKLALQLHPDKNKHPKAEIAFKLVSEAYTCLSDAVKRKAFNLERNKSFCIECNRISYTSNIVTTNSNGSSFKAWNIISKSISSKVRRNIKDMREKLKEEAKVIENCLRKNSVSKKESPIYNPSKNHLHGGRCQHRVEREIPVFNPSNYKYQSYPHSRDNVYKNSKTCWYLQTEKIVQNGNKGGAKYASPVFEVKSSSVDTRKFACVPSKC 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00982 267 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 254 - -
Car01g00982 267 Coils Coil 146 166 - -
Car01g00982 267 SMART dnaj_3 36 93 IPR001623 -
Car01g00982 267 ProSiteProfiles dnaJ domain profile. 37 101 IPR001623 -
Car01g00982 267 CDD DnaJ 37 90 IPR001623 -
Car01g00982 267 Pfam DnaJ domain 37 98 IPR001623 -
Car01g00982 267 Gene3D DnaJ domain 36 159 IPR036869 -
Car01g00982 267 PANTHER BNAC03G44070D PROTEIN 4 254 - -
Car01g00982 267 SUPERFAMILY Chaperone J-domain 27 99 IPR036869 -
Car01g00982 267 PRINTS DnaJ domain signature 73 93 IPR001623 -
Car01g00982 267 PRINTS DnaJ domain signature 57 72 IPR001623 -
Car01g00982 267 PRINTS DnaJ domain signature 39 57 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00982 Car-Chr1 9225775 9227011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00982 23 105 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.710 2.42e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00982 - - gmx:100778573 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00982 01 9225775 9227011 Car01g00982 01 9225775 9227011 ECH
Car07g00541 07 4783602 4784873 Car01g00982 01 9225775 9227011 PCT