Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00959 ATGGGAGTTGAAAAAGAAGGGACTAAAAGTGGAGGTAGTTTTTTCCACTTGTTTGACTGGACCTCGAAATCGCGTAAGAAATTATTTGCATCCAAGTCAGATTTACCAGAGTCATTGAAACAGGAAAGAAAATCCAATCACAATGTGGCAGTGAGACACCCCTATCTGGTGGATGAAGACGATAACGGAGTAGGGGAATGTGTTAGAGGAAGCTGCGATCATAGTTATGCTTCATCAGTTACCGACGACGAAGCATGTGGAACAAGAGCACCTAATGTAGTTGCAAGGCTTATGGGATTAGATTCATTGCCTTCTTCCGGTTTTTCTGATCCCTACTCTACCCCGTATTTCGATACCAGATCCCTTCAAGATTCTCAGTTCCTTCGAAAAAACCATGAGTATGATAATCAGAACCTATATTCCGGAAAGCTTGGTGAAAAAGTTGAAGGATCTTCTAGGAACTTCATGGAGCCAAAGGCTCAAAAGACCATAATTAGGCCAATTGAAAAGTTCCAAAAAGAAGTGTTACCTCCAAAATCAGCTAAAACAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAACCCTGGTTTTGTTCCAACCAACAATGCTGCTTATATAATGGAGGCTGCTGCAAGAATAATTGAACCTGGATCACAAGCAAAGGCGAAAACACCTTTGGCATCATCGACCGTCTCATTGAGGGTTAAAGATCTCAGAGATAAATTGGATTATTCTCAAAAAGGGCCTCTAATTGGTACATCTTCGATAGCCTCGAGGACTCGAGAGATAAAAGAAAAAAGAGAAATTTCTCAAAGAACAAGCAGGGTTTTGGAAAGTTCACAAAGGTCGGTTGAATCAAATGCTGCAAAGTATTTAAAGGGACAATCTTTGAACAGAAGCTGGAATGGATCTGCGGAAACGTCTGTCAAGTCTCCTACACATGCAGAAGAAGACACTTCTTTGAAGAATAAGGGGAAGTCTGTTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAAAAGGGAAGGTTTGACTTCGAACGGTGGAAGAAGTTTGATGGCCCAAAAAGAGCAACTTGACATGAAATCCAATCAGCCACCTAAGTCAAATGCTCAGAAAAATTTGCATAGGAAATCTTCTAGCCAGAATTCTTCTAATGTTCTCAGGCAGAATAATCTGAAACAGAATCATTCGATGGATAATAATGAGAAATTACTATCTAAGCCATTGGTTTCCAATTCACAAGGTAGTAGAAAAGGTATGACAGGAGATTCATCTTACGGACGTCATAGAAGCTCTGGTAGTAAATCCACTGCAAAATCTAAAGCTGGATCACGAAAGCCGGCCGTGGAGGTGACCGATAGCGAAAATGAAATCCTGTATACCAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGAATGGAATGATAGAGTTGTGGATAATTTGTTCATCGACAAAACTCCAAAGCCAGTTAAGTCGAATCTAGCGAGTAATAAACAATATGGTTGGGCTGAAGAAGGAAAAAAGAAAGACATCGATGTAGTTTCCTTCACATTTACTACACCATTAACAAGAAACAACAATCCTGGTTTCGAGACATCCGGACAAAGTGGCCGGAATACTAATGAACTTTCGTTGGATCAACGCATTAAAAGAGTGTTGCTTGACACAGACAATACAAGGTCTCCAATAAAATACAATGTGATTGGTGGTGATGCTTTAGGTATCCTTTTAGAACAGAAGTTGAGGGAATTGACATGCAGTGTTGAAGCTTCCTGCAATGATGTTTCTAAAGTGAGGCAACCTTCCATTACTGCACCAAAGTCAAATGATCAAGTAAACAACTTTAATATAGTTAACATCAATCCAAGATTGCAACAGAAGAAAGACCAAGATGTGTCATTTACCGACAGTTTAAGCAGTAGCCACGGTTCTGATATGTCCTTCACCAATCTGCCAGAATTTTCCTTGAAACATAAATCATGGGGTGATGATATGGAGCCACTGTCATTCAATCGCCGACAACCAAGTCCAATCTCAGTTCTCGAGCCTTCTTATTCGATCGAAAGCTGCGAATCCTCAATGAGCGCAGACATTACTAGTATAGAAGGAAGCAAGATGTTTCCATCTATTCAAGCTCAGGAAATTCATGGCTTTAATTTTTCGAGGAAATTCTATCCTACGGAAACAGATGCAGAGTTATCCGACTCGGCTTCTTCAACATCAACCGGAACTATGATGAAGAAGCGAGCAAGTACATTTTCTGTGATGAAGTTTGGTGAAAGATCAAGTACATGGGAGTTGGACTATGTGAAAGAGATATTATGCAATGTTGAGTTGATGTATATGGATTTTTCCCTCGGCCGAGCTCGCGAGATTGTAAACTCTCATCTGTTCGACCAATTGGAAAGCCGAAAAGGAGGTTGTTTCAAGCGTGATGATGAATCTAGGATAGGAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTTTGGATTTGAGATGCAGACGTTATGCCGGAGGAGGATACGAAATGTGGAATAAAGGGGTTGAAATGGTAAGAAGAAGGGATTGGTTGGCAGAAGATGTGTACAAGGAGATTTCTGGTTGGAAGGCGATGAGGGATTCAATGGTTGATGAGCTTGTGGACAAGGATATGAGTAGTCAATATGGAAAGTGGCTAGATTATGAAGTTGATGCTTATGAATTTGGAGAAGAAGTTGTGGATCAAATATTTAATTCTTTGGTTGATGATGTTGTTTATGAATTCTTGCAATTTTAA 2802 0.399 MGVEKEGTKSGGSFFHLFDWTSKSRKKLFASKSDLPESLKQERKSNHNVAVRHPYLVDEDDNGVGECVRGSCDHSYASSVTDDEACGTRAPNVVARLMGLDSLPSSGFSDPYSTPYFDTRSLQDSQFLRKNHEYDNQNLYSGKLGEKVEGSSRNFMEPKAQKTIIRPIEKFQKEVLPPKSAKTIPVTHHKLLSPIKNPGFVPTNNAAYIMEAAARIIEPGSQAKAKTPLASSTVSLRVKDLRDKLDYSQKGPLIGTSSIASRTREIKEKREISQRTSRVLESSQRSVESNAAKYLKGQSLNRSWNGSAETSVKSPTHAEEDTSLKNKGKSVSLAIQAKVNVQKREGLTSNGGRSLMAQKEQLDMKSNQPPKSNAQKNLHRKSSSQNSSNVLRQNNLKQNHSMDNNEKLLSKPLVSNSQGSRKGMTGDSSYGRHRSSGSKSTAKSKAGSRKPAVEVTDSENEILYTSTNNFPRKKRSTDKEWNDRVVDNLFIDKTPKPVKSNLASNKQYGWAEEGKKKDIDVVSFTFTTPLTRNNNPGFETSGQSGRNTNELSLDQRIKRVLLDTDNTRSPIKYNVIGGDALGILLEQKLRELTCSVEASCNDVSKVRQPSITAPKSNDQVNNFNIVNINPRLQQKKDQDVSFTDSLSSSHGSDMSFTNLPEFSLKHKSWGDDMEPLSFNRRQPSPISVLEPSYSIESCESSMSADITSIEGSKMFPSIQAQEIHGFNFSRKFYPTETDAELSDSASSTSTGTMMKKRASTFSVMKFGERSSTWELDYVKEILCNVELMYMDFSLGRAREIVNSHLFDQLESRKGGCFKRDDESRIGRKVIFDCVSECLDLRCRRYAGGGYEMWNKGVEMVRRRDWLAEDVYKEISGWKAMRDSMVDELVDKDMSSQYGKWLDYEVDAYEFGEEVVDQIFNSLVDDVVYEFLQF 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00959 933 PANTHER EXPRESSED PROTEIN 1 931 - -
Car01g00959 933 Pfam Domain of unknown function (DUF4378) 774 925 IPR025486 -
Car01g00959 933 MobiDBLite consensus disorder prediction 361 445 - -
Car01g00959 933 MobiDBLite consensus disorder prediction 265 289 - -
Car01g00959 933 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 931 - -
Car01g00959 933 MobiDBLite consensus disorder prediction 361 460 - -
Car01g00959 933 MobiDBLite consensus disorder prediction 302 328 - -
Car01g00959 933 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00959 Car-Chr1 8981406 8986016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00959 6 931 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.630 8.00e-96 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00959 - - gmx:102669513 1344.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00959 01 8981406 8986016 Car01g00959 01 8981406 8986016 ECH