Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00937 ATGGATGACTTGTACCATTTTGATGAGTTCAATTTCCATGCACTTGAAGATAAATTTAGTTCATCAAATGATATTTTTTGGGAAACCAAAGGACATAATGAAATGAAAAATGTTCAATTTTCTTTACCACAAGATCTAGGAGATTATAATGGAACTGATGAATCTCTTAACTCTAATTTTGGTTTCATTCCAAATGATCCATCACAAGAACAAGAGTTCCTTCTTTCAACAACTAGTCAACAAAAGTATCATCAAGATTATGAAGCTTTTGATAATCTACACTTTGACATGGTTCATTTTGATGAACAATTTCCAACCAAAGCTGTTCCAATTTGTGAAACAAAAAATGAAAAACAATACCATCAAACTCCAGTGGAAATTTTGAAGAATTATGGAAAAGGATTCAAAAGATTATTACATGATGAAGGAAAAATCCTTCATCCTATTGATGATTTTGATTTAGTCACAAAAAATGAACATGTTAGAAAAAAATTGTCAACCGAAGATATCATGAAAATAGCTGGAACAAGATTCATACAATCATCATCTTCAGAATCTTCTTCATCAGGTAAATTGATTCTTAATCACCCTTTTGGTTTTTCTTTCTCTGGTTTATCTGATGAAGAAAAAGAAGATGTTGCACTAGCTGAATCACTCTTAGCTTGTGCTGAAAAAGTTGGATATCAACAATATGAACGTGCTAGATCTTTTTTATCACAAATCGAGTCTTTATCGTCGAAAACAGGTAATCCTGTTAAACGTGTCGTTTATTATTTCGCCGAAGCTCTTCGACGAAGAATAAACAAAGAAACAGGAAGAGTTTCTGTTTCGTCGAACAATAGTACGAAAAAAATTGAGTCTTTATTTGATCCTGAAGAAACAACTAAGGATTTAAATCCGACCCTTATCGCCTTTTTCGAAGATCTTCCATTCTGTAAAGTTTCTATGTTCACTTGTGTACAAGCTTTGATAGAAAATGTAACTGATGCAAAGAAGATTCATGTGATTGATCTCGAAATTCGAAAAGGGTTGCCATGGACAATACTAATGCAAGAGCTTCAATCAAGAAATGAATTATGTCCACTTGAGATTCTAAAGATAACAGCTATTGTGAGTGGAAACACAAACAATTCAAAGATTATAGTTGATGATACAGGTAAAAGATTGAGTGAATTTGCGCAAAGTTTGAACATAAATTTTTCTTTTAATATAGTTATGGTATCTGATTTATTACATCTAAGTGAAGATCTTTTCGAGATTGATTCGGACGAAACAGTTGCGGTTTATTCGCATTTTGCACTTAGAAGCAAGATTCAAAATTCAGACCAACTTGAAACTATAATGAGAGTTGTTAGAACTATAAATCCTGTAGTTATGGTTGTAGCTGAGATTGAAGCAAATCATAATTCTAAGTCTTTTGTGAACCGTTTCATTGAAGCACTTTTTTACTTTAGTGCATTTTTTGATTGTTTTGAGGATTGTATGAAAAAGGATGAGAAAAATAGAATGATTATGGAATCAATGTATTTTAGTCATGGTATTAGAAACACTGTGGCTGAAGAAGGAGCTGAAAGAAAGAGTAGAAATGTTAAGATTGATGTGTGGAGAAACTTTTTTACTAGATTTGGAATGGTGGAAAAAGAATTGAGTATGATGTGTTTGTATCAAGCTGAATTGGTGGCTAAGAGATATGCTTGTGGAAATTCTTGCACTTTTGATATGAATGGACATTGTCTTCTTGTTGGGTGGAAGGGGACACCAATTGCTTCTGCTTCTGTTTGGAAATTTGTTTGA 1794 0.325 MDDLYHFDEFNFHALEDKFSSSNDIFWETKGHNEMKNVQFSLPQDLGDYNGTDESLNSNFGFIPNDPSQEQEFLLSTTSQQKYHQDYEAFDNLHFDMVHFDEQFPTKAVPICETKNEKQYHQTPVEILKNYGKGFKRLLHDEGKILHPIDDFDLVTKNEHVRKKLSTEDIMKIAGTRFIQSSSSESSSSGKLILNHPFGFSFSGLSDEEKEDVALAESLLACAEKVGYQQYERARSFLSQIESLSSKTGNPVKRVVYYFAEALRRRINKETGRVSVSSNNSTKKIESLFDPEETTKDLNPTLIAFFEDLPFCKVSMFTCVQALIENVTDAKKIHVIDLEIRKGLPWTILMQELQSRNELCPLEILKITAIVSGNTNNSKIIVDDTGKRLSEFAQSLNINFSFNIVMVSDLLHLSEDLFEIDSDETVAVYSHFALRSKIQNSDQLETIMRVVRTINPVVMVVAEIEANHNSKSFVNRFIEALFYFSAFFDCFEDCMKKDEKNRMIMESMYFSHGIRNTVAEEGAERKSRNVKIDVWRNFFTRFGMVEKELSMMCLYQAELVAKRYACGNSCTFDMNGHCLLVGWKGTPIASASVWKFV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00937 597 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 44 595 - -
Car01g00937 597 ProSiteProfiles GRAS family profile. 206 595 IPR005202 -
Car01g00937 597 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 595 IPR005202 -
Car01g00937 597 Pfam GRAS domain family 216 595 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00937 Car-Chr1 8689050 8691023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00937 205 597 GRAS Transcription Factor Family AT3G03450 31.000 2.97e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car01g00937 GRAS 5.4e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00937 - - gmx:100798926 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00937 01 8689050 8691023 Car01g00937 01 8689050 8691023 ECH