Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00936 ATGGACAACACACAAGAAGTGATATTAAAAAAGGTATGTAAAATCTACGACAATCTCTCGAGCATAGAAAACCTTAATCCCTCAAACGATGTGAATGACCTATTTACCCAACTTGTAACAACATGCACCACCTCATGTAATGAATTTGATGTTACTAAATTACCCCAAGAAATTAAAGAAAAAATAGCTAAGCTAATTACCCTTTGTGGAAAAGCTGAAGGACTACTTGAAAGTCATTACTCAACTATAATAGGAACACATGAAAAACCATTAAACCACATAAAAACCTTCCCTTATTACCCCAATTACCTCAAACTCACACATCTAGAATTCACTATGCTCACCAAACACATAACTCAAAAACCTTCAAAACTTGCTTTTATTGGGTCTGGCCCACTTCCTCTAACCTCAATCATGTTAGCAACATATTACCTAACACAAACATGTTTCCACAACTACGACATTGATCCATTGGCAAATTCAAAAGCTTATGATTTAATTTCATCACACCAAGACTTATCAAAAAGAATGTTTTTTCACACTAATAACATTTTTTATGTGAAAAATGTTCTTAAAGATTATAATGTTGTGTTCTTGGCTGCATTGGTTGGCATGGATAAAAAGGAAAAAACAAAAGTGATTAATCATTTGGCCAAATACATGGCTGATGGTGCTATTCTTGTTGTGAGAAGTGCTTATGGTGCTAGAGCTTTTCTATACCCTATTGTTGATCCTTGTTGTGATCTTAAAGGTTTTGAAGTTCTTTCAATTTTTCATCCAATTGATGAGGTTATAAATTCGGTTATTGTTGCAAGGAAGTGTTCGGTGAATCAAGAGGTTTACTTGAAAAGCAAGTGTTGTGAAGTTGAAGGTTTTATTAATCCTTTGAATCATGGGAATGTTATCGAGGAGTTGAGCATTGATGAGAAAGCTTAA 936 0.3397 MDNTQEVILKKVCKIYDNLSSIENLNPSNDVNDLFTQLVTTCTTSCNEFDVTKLPQEIKEKIAKLITLCGKAEGLLESHYSTIIGTHEKPLNHIKTFPYYPNYLKLTHLEFTMLTKHITQKPSKLAFIGSGPLPLTSIMLATYYLTQTCFHNYDIDPLANSKAYDLISSHQDLSKRMFFHTNNIFYVKNVLKDYNVVFLAALVGMDKKEKTKVINHLAKYMADGAILVVRSAYGARAFLYPIVDPCCDLKGFEVLSIFHPIDEVINSVIVARKCSVNQEVYLKSKCCEVEGFINPLNHGNVIEELSIDEKA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00936 311 Pfam Nicotianamine synthase protein 2 276 IPR004298 GO:0030410|GO:0030418
Car01g00936 311 PANTHER NICOTIANAMINE SYNTHASE 1 311 - -
Car01g00936 311 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Car01g00936 311 Gene3D Vaccinia Virus protein VP39 6 275 IPR029063 -
Car01g00936 311 PANTHER NICOTIANAMINE SYNTHASE 3 1 311 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00936 Car-Chr1 8681710 8682645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00936 7 309 Nicotianamine Synthase Gene Family AT5G56080 51.104 1.12e-107 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00936 K05953 - gmx:100814069 444.121