Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00935 atgaaattcatcaacaaaaacaacaacaacaaTATTAACCTGAAAATTTTCTACATAATCCTAATATGTTTTGCAGTAGAAAAATGCATTGCTCACACATTCAAGGACACATCACCAAACATAGAAACAAAATTCAGTTCTCAAGATGCATATCCCCCAAAGGCATCAAGCATATCTGCAGAATCACCTTTTGAATCACCTTCTGAATCACCTTCTGAATCACCTTTTGAATCaccaaaaagacaaacagaaccagaatcagaacATGATACATTTGGTCACTCATCTTCATTTTCAGCTGCATTCTCAGATATTCTAAAAGGTTCATTACGTGGACACTCATTAACAATGCCTCCTCCACACTCACATTCAGAAGCAAAACAAAGCAGCCTAAGCATTGAACAAATATGTGCACACACTGATTACCCTGACGTTTGTCTCGCCACGATTCAACCTCTTATAACTCACAATTTTGAAATGATTAACGTCCTCGAAGCCGCGATTAAAGCTTGTTCTCTTCAAGTAAAGTTGACAATAACAAAAGTGGATAAACATGCTGCTAATAATCCAGAGATTGCTAATGCAGTTGCTGAGTGTAGGGATCAATACAACAATGCTTTGGAAAATCTTCAGAGAGCAATAGATGCTATTTCGTCGCGCGATCTCGGTACAATTACTGTTATGCTTAGTGCTGTTATGGCTGATGTTTCAACATGTGAAAGTGCTTTTGAGGATCTAAAAGCTTCACCTTCTTCTACCATGTCTAGTAATGATGGTTTAGTTAGTATTACTGTTAGCAATTCTCTTTCTATTGCTAATTTGATTCCTTACTAA 834 0.3429 MKFINKNNNNNINLKIFYIILICFAVEKCIAHTFKDTSPNIETKFSSQDAYPPKASSISAESPFESPSESPSESPFESPKRQTEPESEHDTFGHSSSFSAAFSDILKGSLRGHSLTMPPPHSHSEAKQSSLSIEQICAHTDYPDVCLATIQPLITHNFEMINVLEAAIKACSLQVKLTITKVDKHAANNPEIANAVAECRDQYNNALENLQRAIDAISSRDLGTITVMLSAVMADVSTCESAFEDLKASPSSTMSSNDGLVSITVSNSLSIANLIPY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00935 277 PANTHER PECTINESTERASE INHIBITOR-LIKE 108 275 - -
Car01g00935 277 Pfam Plant invertase/pectin methylesterase inhibitor 132 271 IPR006501 GO:0004857
Car01g00935 277 SMART PMEI_2 128 271 IPR006501 GO:0004857
Car01g00935 277 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 133 275 IPR035513 -
Car01g00935 277 CDD PMEI-like_2 132 275 - -
Car01g00935 277 MobiDBLite consensus disorder prediction 43 95 - -
Car01g00935 277 Coils Coil 196 220 - -
Car01g00935 277 MobiDBLite consensus disorder prediction 43 78 - -
Car01g00935 277 PANTHER PECTINESTERASE INHIBITOR-LIKE 108 275 - -
Car01g00935 277 Gene3D Invertase/pectin methylesterase inhibitor family protein 128 275 IPR035513 -
Car01g00935 277 TIGRFAM PME_inhib: pectinesterase inhibitor domain 120 273 IPR006501 GO:0004857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00935 122 274 Carbohydrate Esterase AT5G49180 28.342 1.67e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00935 - - mtr:MTR_2g034220 307.375