Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00933 ATGGCGTTTTGGTGGTCTTTGctcgttctagcattcgctttcgctatctgcaagttccttctcattctcattcCTCCTAAGGTTCCTTCAATCGACGTTGACGCTTCCGATGTGTTGGAAGATGGAAACCAAGCACAGGAGAATAGCTTCATATATGTGCCTCCAAGGGGAGCGACACAGCAATCAGGCAAGAAAGTTCAGTGCTGTGAGCCTGCCACCATGAAATATTTGGGATTTGTTCCTGCATTGACACCAGATGAGGTCAAGGAGCAAATTGAAAAAGTACGGAAGGCACAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGGCGCCAGTTTTTGCGTATACTGTTGAAGTATATAATTAAACATCAGGCTCTTATTTGCGAAATATCGTCACGTGATACTGGAAAAACAATGGTAGATGCCTCTCTAGGAGAAATAATGACAACATGTGAGAAGATCAATTGGCTACTGTCAGAGGGTGAACAAAGTCTGAAACCTGAGTACAGATCCTCTGGAAGATCAATGCTTCATAAGCGAGCCAGAGTAGAATTTCACCCCCTTGGTGTTATTGGGGCCATTGTTTCGTGGAACTATCCCTTCCATAATATTTTTAACCCTATGCTAGCCGCAGTTTTTTCTGGAAATGGTATTGTGATTAAGGTATCGGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATTCAATCAGCTCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTGGTGTCTTCTGTTGATAAAGTCATTTTTGTTGGATCACCTGGGGTTGGTAAGATGATAATGAAAAATGCTTCTGAGACACTTATACCAGTTACACTAGAGCTTGGCGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGAGCTGAACGATTTTATGTCCATAGGAACATTTATCCATCTTTTGTCAGCAAAGTTACCAAAATCATAAAATCTGTTACAGCTGGTCCACCACTTGCTGGGAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTCGAAGGTCTCGTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCACGTGGAAGTTTTGGACCTATAGGTGAAGATGCAGTTGATCAGTATTTTCCTCCTACTGTGATTGTGAATGTGAATCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCTATCATGCCAATAATGAAGTTTAGCTCTGACGAAGAGGTTATCAAGCTTGCTAATGACTCAAAATATGGGCTCGGCTGTGCTGTTTTCTCTGGCAGTCAAAGCCATGCCAGAGAGATAGCTTCTCATATCCATTGTGGGGTAGCTGCAGTTAATGATTTTGCATCAACATACATGTGTCAGTCCCTGCCATTTGGGGGCGTGAAACACAGTGGATTTGGACGATTTGGTGGTGTTGAAGGTTTGCGAGCATGCTGCCTTGTAAAATCAGTTGTTGAAGATAGATGGTGGCCATTCATTAAGACCAAGATACCTAAGCCTATTCAGTATCCTGTGGCAGAAAACGGATTTGAGTTTCAGGAGTCGCTCGTTGAAGCACTATATGGGCTTAGCATATGGGATCGTTTGCAAGCATTGGTTAACGTTTTGAAAATGCTTACTGAGCAGAACTCTACCAGTGGCAATAAGAAGGAGAAATGA 1788 0.4167 MAFWWSLLVLAFAFAICKFLLILIPPKVPSIDVDASDVLEDGNQAQENSFIYVPPRGATQQSGKKVQCCEPATMKYLGFVPALTPDEVKEQIEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQSLKPEYRSSGRSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMKNASETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHRNIYPSFVSKVTKIIKSVTAGPPLAGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGSFGPIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLGCAVFSGSQSHAREIASHIHCGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVNVLKMLTEQNSTSGNKKEK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00933 595 CDD ALDH_F15-22 70 531 - -
Car01g00933 595 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Car01g00933 595 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Car01g00933 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Car01g00933 595 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Car01g00933 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Car01g00933 595 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Car01g00933 595 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Car01g00933 595 SUPERFAMILY ALDH-like 61 529 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00933 Car-Chr1 8662613 8671184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00933 1 594 Aldehyde Dehydrogenase Gene Family AT3G66658 79.630 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00933 - - gmx:100816920 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00933 01 8662613 8671184 Car01g00933 01 8662613 8671184 ECH