Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00926 ATGTCATCGCCTTTGATCTCAAACACAATACCAACAACTGACCGATCACATAGAACAAAGAGGAAGAAAAAAGCCCAATTGAAAGCCCAACAGGCCGAGGCCCAAGAACAGAGCCACGTGAAATGGAAATCGCAGGCCCAACAACAAATCTACTCTTCCAAGCTACATCAGGCTTTAGCGAGAGTCAACCTCTCCGGCGGCGGAGGGCCTCGCCGTGGTAAAGCTGTCCGGGAAGTCGCCGACAGAGTGCTCGCCGTCGCCGCCAAAGGGAGGACAAGGTGGAGCAGGGCCATCCTAACCAACAGGCTGAAGCTCAAATTCAGGAAACCAAAGAGACATCAAAATTGGACAGTTGGGCCGGGCCGGTCCAAAAAAGCCCGGAAAGAAACTTTACCGGTTATTCTTGCAGAAGCCATTAATTACATACCGGCTCTTGAGATGCAAGTTCGAGCCATGTCGGCGCTAGCTGATTTACTCTCTGGCTCTTCTTCATCTTCTGCCGGCTCCGGCTTCCCGCCGCCGAGTTAA 528 0.5246 MSSPLISNTIPTTDRSHRTKRKKKAQLKAQQAEAQEQSHVKWKSQAQQQIYSSKLHQALARVNLSGGGGPRRGKAVREVADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRHQNWTVGPGRSKKARKETLPVILAEAINYIPALEMQVRAMSALADLLSGSSSSSAGSGFPPPS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00926 175 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 127 169 - -
Car01g00926 175 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 13 127 - -
Car01g00926 175 Coils Coil 17 37 - -
Car01g00926 175 MobiDBLite consensus disorder prediction 1 38 - -
Car01g00926 175 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 127 169 IPR044660 GO:0006355
Car01g00926 175 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 13 127 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00926 Car-Chr1 8550700 8551321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00926 39 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 43.094 1.53e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00926 - - gmx:100792237 179.489