Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00925 ATGCTTCAGGCATTGATGAATCTTCTCTCTCCGTGTTGGAGGCCGTTCGGGCACGGTGACAATTCTTCATCGGGCATTGTCGGAAGAGAAGGTAGAGACGGATTGCTTTGGTTTCGTGATTTCGGTAGGTATGGCTCCGGCGAATTCTCCATGGCCGTCGTTCAAGCAAATCAAATCCTTGAAGATCAGAGTCAGATCGAATCCGGTCCACTTGGAACCTTCGTCGGCGTTTACGACGGTCACGGTGGTCCCGATGCTGCGCGTTATGTCTGCGATCACTTGTTCCGAAATTTTCAAGCGGTATCGAGTGAGTCACGGGGTGTTGTGACCGCTGAGACCATTCAAGCGGCGTTTCGTTTAACTGAAGAAGGGTTTACTGCCATGGTTTCTGAACTATGGAATACTCGACCACAAGTTGCAACTACTGGAACTTGTTGTTTGGTTGGAGTGATTTTTCAGCAGACGCTTTTTATTGCAAATGTGGGAGATTCTCGTGTTGTGTTGGGGAAGAAAGTTGGGAATACTGGTGGGGTTGCGGCGATTCAGCTGTCTACTGAACACAATGCAAATCTCGAGGCTGTTAGACAGGAACTTAGAGAGTTACACCCTCATGATCCCCAGATTGTTGTTCTCAAGCATGGAGTGTGGAGAGTAAAAGGAATTATTCAGGTTTCTAGATCTATAGGCGACGTGTATATGAAACATGCGCAGTTTAATCGGGAACCAATTAATGCAAAATTCAGGCTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCATCTATTATTTCTCATCCTCTCCAACCAAATGATTCCTTCGTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAATAATGATCAAGCAGTTGATATTGTTCACAGAAATCCACGTGCGGGTAGTGCCAAGAGACTTATCAAGGCGGCCTTGCAGGAAGCAGCTAGAAAACGTGAAATGCGATATTCAGACCTTCGGCAGATTGACAAGAAAGTTCGACGGCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATATCTAGAGAGAATCGCATTGGAAGATTAAAGGATTTTCCATCGAAGAAGAACAAGTCTAACAAGATCTCGAACAAGTGCTTGAATGAATCATTTGCATCGCTTTCTGAAGAATCTGTGGATTTATCACCGATTTCTGATATTACTCACACAAATTTCAACGAAGATGTTACAACGTTCTTGTTAGAAGAATCTTCCTCTGTGACTTTGCTTCAACCTGATACATTACAGTCTGAAAAGATCACTGACACAACGGAAAATAGTTCCTCTAATTGCTTCGATATCTGCGAGTTTACGAAATTTGCTTGTGTGGAGGATGAGATCGCTATGAATTTTCTCAAAAATGTTAAACCTAATGAGATCCTTACTTCTTCGGTCAATGCTGCTCCTCAATATAGAAAGATTACAGACGAGATAATTCAGTATGTCACAGACGATCTCAACAGCGATACGCTGCCAGTGGAAAGATGTCATAGATGTTCTCAATTGCAAGTGCGTTCGAGGAAAAATCGATTTCTGTCTCTATGTGTCTTCATTTGCTTCATTGGAGTATTGGTTGTGATTCTCTTCACTCCTGATGTTGATTGTGGACTAGTGCCAACTTGA 1665 0.427 MLQALMNLLSPCWRPFGHGDNSSSGIVGREGRDGLLWFRDFGRYGSGEFSMAVVQANQILEDQSQIESGPLGTFVGVYDGHGGPDAARYVCDHLFRNFQAVSSESRGVVTAETIQAAFRLTEEGFTAMVSELWNTRPQVATTGTCCLVGVIFQQTLFIANVGDSRVVLGKKVGNTGGVAAIQLSTEHNANLEAVRQELRELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINAKFRLPEPMNMPILSANPSIISHPLQPNDSFVIFASDGLWEHLNNDQAVDIVHRNPRAGSAKRLIKAALQEAARKREMRYSDLRQIDKKVRRHFHDDITVIVLFLNHDLISRENRIGRLKDFPSKKNKSNKISNKCLNESFASLSEESVDLSPISDITHTNFNEDVTTFLLEESSSVTLLQPDTLQSEKITDTTENSSSNCFDICEFTKFACVEDEIAMNFLKNVKPNEILTSSVNAAPQYRKITDEIIQYVTDDLNSDTLPVERCHRCSQLQVRSRKNRFLSLCVFICFIGVLVVILFTPDVDCGLVPT 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00925 554 SUPERFAMILY PP2C-like 57 350 IPR036457 -
Car01g00925 554 Gene3D - 41 360 IPR036457 -
Car01g00925 554 SMART PP2C_4 35 347 IPR001932 -
Car01g00925 554 PANTHER ALPHABET, ISOFORM E-RELATED 3 358 - -
Car01g00925 554 CDD PP2Cc 49 349 IPR001932 -
Car01g00925 554 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Car01g00925 554 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 358 - -
Car01g00925 554 Pfam Protein phosphatase 2C 71 318 IPR001932 -
Car01g00925 554 ProSiteProfiles PPM-type phosphatase domain profile. 45 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00925 Car-Chr1 8534474 8542851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00925 8 350 PP2C-type Phosphatase Gene Family AT3G55050 60.511 1.63e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00925 K01102 - gmx:100790813 630.557