Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00910 ATGTCAAATTTCAAGAACGGTGACTATACGGTTGAGGAAACACGACCCAACAAACGGTTAAAGGAAAACGTCAACGTCGGTGACGCCGTTGATGATAACCGTCACTCACTAAATTCTTGGTGTCCCGCTACCGTTAAATTTCACGGTGCAAATGGTATTAACGATTCTGTAACAGTCGATCCGTGTGGTTTCCGACTTCACCATGATAGTATCAATGACGTTGACTGGGTCCCACCTCTCCGTCAACAACTTCAGGAGAAACCACTTGAGATTGAACAAAAGCCTAAAAAATTGAAGATTAGAATAAAAAAATACACAGGGAAGCCAAATATTGAATCGAAGTTTAAAAAGGGTGAAAAAGTGGAAGTTAGTAGTGATGAAGAAGGTTATAAGGGTGCTTGGTTTGTTGCATCTATTGTTGACACATTAGAAAAAGACAAGTTTCTAGTTGAATATAGAGACTTGATGAATGATGATGGAACTCAACTATTGAAAGAAGAAATTGATGCTATGTTTATTAGGCCTTGTCCTCCTCAACTTCAAAATTTTGGTTGTTACAAAAGGTTACAAGAAGTTGATGCATGGTACAATGATGGATGGTGGAAAGGCATGGTTGTTGGATTGTTGAATGGAAAAGAGTGTTTTGTTAGATTTATGTATAATGAAGTGTTGAAATTTGAATATTCTAAACTTAGGCCTCATCAAGATTTGTTTGAGGGTAAATGGGTCATTTCTTCAAACAAGGAGTCAAGTGAGCTAGTGAAGAAGTTTGGAGATGTGAAACCTAAAGTCAAGAATCTAGCTGGAACAAAATTAATTTCAAAATGTCAAATTCCTAATGAGCAATATGCAAAGCAGCATAAAGATGTAACTACAAGGACTATAAACAATAGAAGCAAATTTGTATTACATTTCTATAAAGGTGCAAAGGTTGAAGTTAGAAGTGATGAAGAAGGCTATGAAGGTTCATGGTTCACTGCAACTGTTGTTGATTTCTTGCAGAATGGAAAGTACTTGGTGGAGTATTTGTCACTGAAAACAGATGATTTGACTGAACAACTGAGGGAAGAAGCAGACGGTGAAGATCTTAGGCCGTATCCGCCGGATATCAATCGGTTTCGTCGATTTGTGGCGGGCGAAAGGGTTGATGCTTGGTATAATGATGGATGGTGGGTAGGCCAGGTATCTTGTGTTCTTGATGGTTTCAAGTATAGGGTTTATTTTTGGACTTCAAATGAGGAGCTTGAATTTGAACATTGTCATATGAGGCCTCATCAAGAATGGATTGGTGGAAGATGGATGCTTGCTTCTTTGGGCTGA 1320 0.3833 MSNFKNGDYTVEETRPNKRLKENVNVGDAVDDNRHSLNSWCPATVKFHGANGINDSVTVDPCGFRLHHDSINDVDWVPPLRQQLQEKPLEIEQKPKKLKIRIKKYTGKPNIESKFKKGEKVEVSSDEEGYKGAWFVASIVDTLEKDKFLVEYRDLMNDDGTQLLKEEIDAMFIRPCPPQLQNFGCYKRLQEVDAWYNDGWWKGMVVGLLNGKECFVRFMYNEVLKFEYSKLRPHQDLFEGKWVISSNKESSELVKKFGDVKPKVKNLAGTKLISKCQIPNEQYAKQHKDVTTRTINNRSKFVLHFYKGAKVEVRSDEEGYEGSWFTATVVDFLQNGKYLVEYLSLKTDDLTEQLREEADGEDLRPYPPDINRFRRFVAGERVDAWYNDGWWVGQVSCVLDGFKYRVYFWTSNEELEFEHCHMRPHQEWIGGRWMLASLG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00910 439 Gene3D - 102 182 - -
Car01g00910 439 Gene3D - 294 373 - -
Car01g00910 439 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 42 437 - -
Car01g00910 439 Pfam Agenet domain 308 368 IPR008395 -
Car01g00910 439 Pfam Agenet domain 118 178 IPR008395 -
Car01g00910 439 SMART agenet_At_2 303 371 IPR014002 -
Car01g00910 439 SMART agenet_At_2 184 239 IPR014002 -
Car01g00910 439 SMART agenet_At_2 113 181 IPR014002 -
Car01g00910 439 SMART agenet_At_2 374 430 IPR014002 -
Car01g00910 439 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 42 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00910 Car-Chr1 8367367 8370201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00910 314 428 PHD Transcription Factor Family AT5G58610 29.630 7.62e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00910 - - mtr:MTR_2g033390 492.271