Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00897 ATGGCGGCCATGGAAACCGAGGCTGCCACCACTCCACACCTGGCTCTCTCTGATACAGATATCAACTGGGACAGGTTGGATAAGACAAAATTCCACATAATTGGTGCAATACTCTTCACAGCTCAATCAGCATTACTTCATCCAACGGCTGTGGTGAAGACAAGGATGCAAGTAGCTACTTCAGGGCTCTCCAACATGAAGGGAACATCAGTGTTCACGCACATTTTAAAGAGTGATGGAATTCCTGGAATCTTTAGAGGTTTTGGAACTTCTGCTATTGGATCAATACCTGGTAGGGTTTTAGCCCTCACTTCTCTTGAGATGTCAAAGGACATTGTCTTGAAACACACTCAAGGTAGTGATATTCCACAAGCATCAAGGGTTGCTCTTGCAAATGCTGTTGCTGGCATGGTTTCAAATTTGGTATCTTGTGTTTACTTTGTGCCTTTGGATGTGATCTGTCAGAGGTTAATGGTTCAAGGTCTTCCGGGAACTACATGTTGTAGAGGACCATTTGATGTTATCCGTAGAGTAGCGCAGGCCGAGGGTTTTCGTGGCTTGTATAGAGGTTTTGGATTAACAGCAGTAACCCTGTCGCCAGCATCTGCAATTTGGTGGGGTTCATATGGGGCTGCACAGCACATAATTTGGAGGAGTTTGGGATACAAAGATGATATGGAAAAGAAGCCTTCACATGTGGAAATGGTGACAGTTCAGGCTACTGCTGGGATGGTTGCTGGTGCTTGTTCCTCTGTTATCACTACTCCCATAGATACCGTAAAAACACGACTTCAGGTATATGGAACTTCTTGTTTCTTTTGCGCAGTTGAAGAAGaaaaaaaatttggcctagtttggatttag 864 0.4329 MAAMETEAATTPHLALSDTDINWDRLDKTKFHIIGAILFTAQSALLHPTAVVKTRMQVATSGLSNMKGTSVFTHILKSDGIPGIFRGFGTSAIGSIPGRVLALTSLEMSKDIVLKHTQGSDIPQASRVALANAVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTTCCRGPFDVIRRVAQAEGFRGLYRGFGLTAVTLSPASAIWWGSYGAAQHIIWRSLGYKDDMEKKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVYGTSCFFCAVEEEKKFGLVWI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00897 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 287 IPR018108 -
Car01g00897 287 Gene3D Mitochondrial carrier domain 24 285 IPR023395 -
Car01g00897 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Car01g00897 287 SUPERFAMILY Mitochondrial carrier 24 270 IPR023395 -
Car01g00897 287 PANTHER OS01G0329400 PROTEIN 3 267 - -
Car01g00897 287 Pfam Mitochondrial carrier protein 130 217 IPR018108 -
Car01g00897 287 Pfam Mitochondrial carrier protein 33 116 IPR018108 -
Car01g00897 287 Pfam Mitochondrial carrier protein 238 269 IPR018108 -
Car01g00897 287 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Car01g00897 287 PRINTS Mitochondrial carrier protein signature 243 265 IPR002067 GO:0055085
Car01g00897 287 PRINTS Mitochondrial carrier protein signature 188 206 IPR002067 GO:0055085
Car01g00897 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 112 IPR018108 -
Car01g00897 287 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00897 Car-Chr1 8101632 8104749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00897 18 268 Chloroplast and Mitochondria Gene Families AT5G15640 48.221 2.17e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00897 K15121 - jre:109001167 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00897 01 8101632 8104749 Car01g00897 01 8101632 8104749 ECH