Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00896 ATGGACAAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTACAAGAGTTTTTTGCAGGGAAGGAGTTGTGCGAGAGCATTAATCCTGATGAGGCTGTGGCTTATGGGGCAGCTGTTCAGGCTGCATTGTTGAGTGAAGGCTTTAACAATATTCCAAAGCTGGTGTTGCAGGATGTTACACCTTTGTCTCTTGGTAGGTCAGTATTAGGAGATATCATGGATGTGGTGATTCCTAGGAACACTTGCATTCCTGTCAAAAAGACAAATGAATATGTTACAGTTAATGATAATCAATCTACTTCTTTTATTGAAGTTTATGAGGAGGAATTAAGGTTGTCTCCCGAAGAAATTAAACATTTGATTAAAGAGGCTGAGAATTTCCACATTGAAGACAAGGAATTTCTAAAGAAAGCTGAAGCAGTCAATGCATTGGACAATTACATTTACAGAATGAGTAATGCTTTAAAGAAGAAGGATATTAATTTAAAGCTTTCCTCAAAAGAGATCAACAAGATAGAATCTGAAATAGCAGTAGCTACAAATTTGCTTGATGAGGATCAACATAACAATGAAATAGATGTTCTGGAGAATCATTTGAAGGAGTTCAAGATTAGTTTGGAACACATCATAGCAAAGACTGTTTAG 678 0.3717 MDKSSVDDVVLVGGSSRIPKVQQLLQEFFAGKELCESINPDEAVAYGAAVQAALLSEGFNNIPKLVLQDVTPLSLGRSVLGDIMDVVIPRNTCIPVKKTNEYVTVNDNQSTSFIEVYEEELRLSPEEIKHLIKEAENFHIEDKEFLKKAEAVNALDNYIYRMSNALKKKDINLKLSSKEINKIESEIAVATNLLDEDQHNNEIDVLENHLKEFKISLEHIIAKTV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00896 225 PANTHER HEAT SHOCK PROTEIN 70KDA 1 120 IPR013126 GO:0005524|GO:0140662
Car01g00896 225 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 120 - -
Car01g00896 225 Coils Coil 180 216 - -
Car01g00896 225 Gene3D - 1 35 - -
Car01g00896 225 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 150 223 IPR029048 -
Car01g00896 225 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 56 122 IPR029047 -
Car01g00896 225 Pfam Hsp70 protein 2 121 IPR013126 GO:0005524|GO:0140662
Car01g00896 225 Pfam Hsp70 protein 122 222 IPR013126 GO:0005524|GO:0140662
Car01g00896 225 Gene3D - 123 225 IPR029048 -
Car01g00896 225 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 61 156 IPR029047 -
Car01g00896 225 PANTHER HEAT SHOCK PROTEIN 70KDA 119 223 IPR013126 GO:0005524|GO:0140662
Car01g00896 225 ProSitePatterns Heat shock hsp70 proteins family signature 3. 9 23 IPR018181 -
Car01g00896 225 Gene3D - 36 53 - -
Car01g00896 225 PANTHER HEAT SHOCK 70 KDA PROTEIN 119 223 - -
Car01g00896 225 SUPERFAMILY Actin-like ATPase domain 2 55 IPR043129 -
Car01g00896 225 PRINTS 70kDa heat shock protein signature 38 58 - -
Car01g00896 225 PRINTS 70kDa heat shock protein signature 6 22 - -
Car01g00896 225 PRINTS 70kDa heat shock protein signature 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00896 Car-Chr1 8072942 8073736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00896 114 223 Calmodulin-binding Proteins AT3G12580 40.000 1.01e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00896 K03283 - gmx:102667572 219.935