Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00889 ATGTGTAGTATCTTTGTCTCTATTTTCACAACCATGGAGAATAATAATTACCAAGGTGATTTAACTGACATAATTAGAGCTAGTGGTGGAGCTGAACCtcaacaacatcatgatcaatggcatcataatcataatcatgatcaATTCTCTTCTGATATTCACCCTTTAAGTTTCTCTTCTATTCTTGAAGGAACCAACAACATCTTTGGTGATCCATTATATTCAACTTTAAGAGACCCTTTTTTACAACAACTTGATACTGCTACTAATACTACAGGttcttcttcttcttcttctacttcttcttcAACTTCATATTTCAACATCACAACAACAAGTACTACTACTTCTACTTCTTTGGAACAACAAGGAGTTTCAATAATTGATGTTGCTTCTTCAGCTGGTGTTGCACTTGATCATCAACATCATGATATCATGAGATCAAGAAGACCAATATGTAAAAACATATTCTCAAATATGATTCAGATCTCTCCAAATAATGCAAAGTTATTACCTTATGATTCTAATTCAAACATCATGGCACCTTCTCCAAGGCCAATTATTAATAAACCTTCTTCTTCTTCTGCTATTGTCAATGTTTCACCCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACAACAATACAGGAGGAGGAGGAGTTCAGATCTCATCTTCAAGGAATACAAATCTTAAAAGAAGGAAGAATCAGGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCTGCTGCAAACAGCAGACAAACTGGAGAAGTTGTTCCTTCAGATTTGTGGGCTTGGAGGAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTACTATAGATGCAGCAGTTCAAAGGGTTGTTCAGCAAGAAAACAAGTTGAAAGAAGCAGAACAGATCCAAACATGTTGGTTATTACTTACACTTCAGAACACAATCATCCATGGCCAACTCAAAGAAATGCTTTAGCTGGTTCAACAAGATCTCAACCAACCAAAAACAACAATGCTTCTATCAAGAATTCATCAGAAACTTCTTCTCAGCTTGAAAATAACACAACAAAACCAAAAGAAGAAGAGAGCAACAACAACAGTGATGGAAATGATTCACCAGTTAATGTGAATGCTGTGAAGGAAGAGATGGAATTGGATATTGAGAAGCAATTTGAGATGGATGAAGGTGAATTCAGTGATGGACTTTCTTATAAGCCAACTATGATTGAAAGTAATCAAAGTCATGAAGATTTTTTTGCTGAATTGGGAGAAATTGAAGCTGATCCATTAAATTTATTGTTTAATCAAGGTTTTGGTTCAAGTAATGTTGATGATCATCAAAGGGAATCATCTTCCAAGGGTTTAGATCCATTTCATCTATTTGACTGGTCAGGAGACAACAATACAAACAACTCATTTGAAGAACCAAATAAGAGAAGGTTATGA 1458 0.3374 MCSIFVSIFTTMENNNYQGDLTDIIRASGGAEPQQHHDQWHHNHNHDQFSSDIHPLSFSSILEGTNNIFGDPLYSTLRDPFLQQLDTATNTTGSSSSSSTSSSTSYFNITTTSTTTSTSLEQQGVSIIDVASSAGVALDHQHHDIMRSRRPICKNIFSNMIQISPNNAKLLPYDSNSNIMAPSPRPIINKPSSSSAIVNVSPNININAKDSLLDNNNTGGGGVQISSSRNTNLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPTKNNNASIKNSSETSSQLENNTTKPKEEESNNNSDGNDSPVNVNAVKEEMELDIEKQFEMDEGEFSDGLSYKPTMIESNQSHEDFFAELGEIEADPLNLLFNQGFGSSNVDDHQRESSSKGLDPFHLFDWSGDNNTNNSFEEPNKRRL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00889 485 MobiDBLite consensus disorder prediction 306 358 - -
Car01g00889 485 Pfam WRKY DNA -binding domain 264 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g00889 485 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 470 IPR044810 GO:0003700
Car01g00889 485 SUPERFAMILY WRKY DNA-binding domain 260 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car01g00889 485 MobiDBLite consensus disorder prediction 279 378 - -
Car01g00889 485 Gene3D WRKY domain 236 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car01g00889 485 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 18 470 - -
Car01g00889 485 MobiDBLite consensus disorder prediction 446 485 - -
Car01g00889 485 SMART WRKY_cls 262 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g00889 485 ProSiteProfiles WRKY domain profile. 257 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g00889 485 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00889 Car-Chr1 7990551 7993299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00889 1 485 WRKY Transcription Factor Family AT1G30650 41.717 3.42e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car01g00889 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00889 - - aprc:113852911 509.99