Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00871 ATGATTCCACAATTTACATTTCATATCATCATTTTAATTATAATATCCCTCATATCTCCACCACTAACATATGCACAAGCAGAATATGAATTCATAGCACAACGTGATTGTGCTTCAACATGTGGAACAATTTCAATCCCTTTCCCATTCGGTATGAATGAACCTCATTGCTATGCACACAAATGGTTCGAAGTAGAATGCAAATTAGACAACACTTCTCATATTGAAAAACCTTACTTGAAGTCATTAAATCTTGAGGTAACACTTTTTGACGTAAACTCAGCCTTGGTAGAAATCATGAATCCAATTTACCATTCCAATTGTaaaaaaaacaataacaacaacaacaataaaacTGTTGTTATAAACCTTAAAGACAGTCCTTTCATTTATTCCCAACAGTACAACACATTTCTAGCCGTTGGATGTAACAATCTTGCTTTTCTTCAATCAAATGGAACAACGGTTGGTGGTTGTGTTTCAATCTGTGAAGACAATAACAACAATTTCAATTTGGAGAGCCGTAGTTGCAACGGAAGATACTGTTGCGAAACATCACTACCTATGCATCTTGCGGAGTATAACGCAACATTACAAGGTTTAAGGAAAGAGAGTAGTGATCATGATGAGTGTAGTTATGCTTTGATTGCAAGTGATTTTTGGTTTTCTTTTGATTGGTCTTTTATGACGGATTCAGAGATTGAAAAAATGAATAATTTGAAGAATATGGAGTATGCTCCTGGGATACTTGAGTGGGAGATTTTGAATGAGATGTTCGTTAATTCGACATTTCAAATTCCTTCAGATTCGGTTTGTTATGATTCTAAACGTACATCTTTAACTAATAGGACTACTGGTCGCCGATGTGATTGTCCCTCTGGCTACAATGGTAATCCCTATGTTCTTGGAGGCTGCACAGTTATTCAAGGGTTCTTCAATAAGAATAATCGATCGAAGAAGTGGGTTATTGTAGGAGTTTCGTCAAGTCTTGGATCTATAGGTTTCCTCATTGGTCTATGGTTATTGCATAAAGATGTGAAGAAAAGAATGATAAAGAAACGCAAAGAAAAATTCTTCAAAAGAAATGGTGGTTTATTATTACAAAAAAGAATGTCTTCTGGAGAAGTAAATATTGACCAAACAGTTCTCTTCACCTTAAAAGATTTAAAGAAAGCCACTGACAATTTCAATAAGAACAGAGTCCTTGGAAAGGGAGGACAAGGTACAGTTTACAAAGGCATGTTAGTAGATGGTAGAATTGTTGCTGTGAAAAAGTTTAAGGTTGAAGGAAAAGTTGAAGAGTTCATCAATGAGTTTGTTATTCTCTCACAAATCAACAATAGAAATGTTGTCAAACTATTAGGATGTTGTTTGGAGACAGAAATTCCATTGCTTGTTTATGAATTCATTCCAAACGGTAACCTTTTCGAGTATTTGCATGACCGAAATGAGGACATACCAATGACATGGGACATGCGTTTGAGAATTGCTACTGAAATTGCTGGAGCTCTATTTTACTTACACTCAATTGCATCTCAACCCATTTACCATAGAGACGTCAAATCAACAAATATACTATTGGATGAAAAGTATAGAGCAAAATTGGCAGATTTTGGAGCATCAAGAATAATTTCAATTGAAGCTACTCACCTTACCACAGTGGTTCAAGGTACTTTTGGATACTTAGACCCTGAATATTTTCATACTAGTCAATTTACTGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTGCTGAACTTTTAACTGGTAAGAAGCCAATAACCTCTGTAGAATCTGGTGAATCCCAAAGTTTAGCTTCCTATTTTGTTCAGTGTATGGAGGAGAATAGGTTGTTTGACATTGTAGACGAAAGGGTCACAAAAGAAGGGGAGAAAGAACATATTGTTGCAGGTGCAAATCTTGCATATAGATGCTTAGAGATGAATGGAAGAAAACGACCAACTATGAAAGAAGTTACATTAGAGTTGGAAGGGATCATGCGATTAAATAAGAAGCTTAATGCACAACAAAACCATGAGGAAATTGAGCTTGCTGGAATTGAAGAGTCCCAACCTTGGGATGGGTATTATGCATCAAATTCATGGCCAATTGTCAGCAGCCAAACACACTCCACAAACTCGGAGGTCACGCATATTCTTGCATTAAAATAG 2175 0.3554 MIPQFTFHIIILIIISLISPPLTYAQAEYEFIAQRDCASTCGTISIPFPFGMNEPHCYAHKWFEVECKLDNTSHIEKPYLKSLNLEVTLFDVNSALVEIMNPIYHSNCKKNNNNNNNKTVVINLKDSPFIYSQQYNTFLAVGCNNLAFLQSNGTTVGGCVSICEDNNNNFNLESRSCNGRYCCETSLPMHLAEYNATLQGLRKESSDHDECSYALIASDFWFSFDWSFMTDSEIEKMNNLKNMEYAPGILEWEILNEMFVNSTFQIPSDSVCYDSKRTSLTNRTTGRRCDCPSGYNGNPYVLGGCTVIQGFFNKNNRSKKWVIVGVSSSLGSIGFLIGLWLLHKDVKKRMIKKRKEKFFKRNGGLLLQKRMSSGEVNIDQTVLFTLKDLKKATDNFNKNRVLGKGGQGTVYKGMLVDGRIVAVKKFKVEGKVEEFINEFVILSQINNRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYLHDRNEDIPMTWDMRLRIATEIAGALFYLHSIASQPIYHRDVKSTNILLDEKYRAKLADFGASRIISIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTGKKPITSVESGESQSLASYFVQCMEENRLFDIVDERVTKEGEKEHIVAGANLAYRCLEMNGRKRPTMKEVTLELEGIMRLNKKLNAQQNHEEIELAGIEESQPWDGYYASNSWPIVSSQTHSTNSEVTHILALK 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00871 724 Gene3D Phosphorylase Kinase; domain 1 364 469 - -
Car01g00871 724 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 14 721 - -
Car01g00871 724 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 721 IPR045274 GO:0007166
Car01g00871 724 ProSiteProfiles Protein kinase domain profile. 396 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00871 724 Coils Coil 657 677 - -
Car01g00871 724 Pfam Protein kinase domain 396 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00871 724 SMART serkin_6 396 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00871 724 Gene3D Transferase(Phosphotransferase) domain 1 470 691 - -
Car01g00871 724 SUPERFAMILY Protein kinase-like (PK-like) 380 663 IPR011009 -
Car01g00871 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Car01g00871 724 Pfam Wall-associated receptor kinase galacturonan-binding 37 90 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00871 Car-Chr1 7806516 7809872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00871 12 682 Receptor kinase-like Gene Family AT1G16260 43.391 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Car01g00871 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00871 - - mtr:MTR_2g031530 1060.44