Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00848 ATGAAGCTCTTTACCCTTTTAGTTTTATTTTTATCTTTCTTTTCCATTATGGGACAGCTTCCTTCACAGGACATTTTAGCATTGTTGGAATTTAAGAAATGCATCAAGCATGACCCTACTGGTTATGTCCTGAATTCATGGAATGAGGAATCCATTGACTTTGATGGATGTCCATCTTCATGGAATGGAGTTCTTTGTAATGGTGGTAATGTTGCCGGTGTTGTACTTGATAACTTAGGTCTTTCTGCTGATACTGATTTGAGTGTTTTTTCAAATCTATCAAAGCTTGTGAAACTTTCCATGGCCAACAATTCCATATCAGGAAAACTAACCAACAATGTTGCCGATTTCAAAAGCCTTCAATTTCTTGATATTTCCAATAACCTCTTTTCGTCATCCATACCGTCCGGAATTGGTAAATTCGATAGCTTGCAGAATCTGTCATTGGCTGGAAATAACTTTTCTGGTCCAATTCCAAACACTATTTCAGAAATGGCTTCCATCGAATCATTAGACTTGAGCCGCAACACCCTTTCTGAAGCGCTACCACCGTCGTTGACTAAGCTGAATAGCATTGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGAAAAATTCCCAAAGGCTTTGAGCTTATTTCTAGCCTTGAAAAACTCGACTTGCACAGTAATATGCTTGATGGTCCTTTAGATGTTGAATTTATGCTTTTATCAGGTGCCAGCTATGTTGATTTAAGTGATAACCTGCTGGTGAGTTCTGATTCTGGGAAATTTCTACCACGAATATCTGAAAGTATTAAGTATTTGAATCTAAGCCACAACCAGCTTACTGGTTCATTGGTTGGTGGAGCTGAACAACCTGTTTTCCAAAACTTGAAGGTGTTGGACCTCAGCTATAACCAATTGAATGGTGAATTACCTGGATTTGATTTTGTTTATGATCTCCAGGTCCTTAAGCTTAGCAACAACAGATTTTCAGGATTTATTCCGAACGGCTTACTTAAAGGAGATTCTTTGGTTTTAACTGAACTGGATTTGAGTGCCAACAATCTCTCGGGGCCATTGAGTATGATTACATCAACAACACTTCACTCTCTTAATCTCTCGTCAAATGGTTTCACTGGTGAGCTGCCGCTGCTGACTGGAAGTTGTGCTGTACTTGATCTATCAAACAACAAATTTGAAGGAAATTTAACCAGGATGTTGAAATGGGGGAACGTAGAATATCTCGATCTCAGTCGAAATCATTTGGCAGGGAACATCCCTGAGGTAACTCCTCAGTTTTTGCGAATGAATTATTTGAATCTATCGCATAATGATCTTAGTCACGACCTTCCAAGAGTGTTAACACAGTATCCAAAACTTAGAGTGCTTGATATCAGTTCCAACCAATTTAAAGGCCTACTTCTACCTGATTTTTTCACAATGCAAACATTACAAGAGCTCCATCTTGAAGATAATTTGATCTCTGGTAGCATCAATTTATCATCTTCTCTTGACCAATCTCATCTTCAAGTTCTTGATCTTTCTCACAACCAGCTTACTAGCTTTTTTCCTGATGATCTTGGCTCATTAACTAGCCTGAAAGTTCTCAATATTGCTGGAAATAGTTTTGTTGGTTCTCTTCCGACCACTATTGCTGACCTGAGTTCTCTAGACTCCTTGGATATATCAGATAATCATTTTACTGGTCCACTTCCAAATAACATGCCAAAGGGACTCAAAGGCTTCAATGCTTCAAACAATGATCTATCTGGAGTTGTACCAGAAACTCTTAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATGCTAAGTTACATTTTCCAAACAGTCCTCCTGGATCAACCCTTTCACCTACTGAAAGTTCGGAGGGAAAGAAGTCCATGACCACTGTTGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCTCTCTTCATATTAATCTTACTGGCTGTCTTCATACACTACATACGTATGTCAAGATCTCCTACACCAGAATATGACACAGGTAAGGATATCCGTGGACGCTCGCAGCCAGTTATCTCTGGACCAGTTCGTTCGACAGAGAGGGGTGGTGCTTTGGTTGTATCAGCCGAGGACCTTGTGGCCTCACGTAAAGGGTCGCCATCGGAAATAGTTAGTCCTGATGAAAAAGTTGCAGCTGTAGCTGGATTCTCTCCATCAAAACACAGCCACTTTTCATGGTCACCAGGGTCTGGTGATTCATTGACTGCTGAAAATCTCTCAAGACTAGATACAAGGTCGCCGGATAGGTTGATTGGTGAGCTGCATTTTCTCGATGATTCGATATCACTAACACCCGAGGAGCTATCAAGGGCTCCAGCTGAAGTTTTGGGAAGAAGTAGTCATGGTACTTCTTACAAGGCAACTCTGGATAATGGTTTGTTGTTGAGAGTAAAGTGGTTGAGAGAAGGAGTGGCGAAACAAAGGAAAGAATTTGTTAAAGAGATAAGAAAGTTTGCAAACATCAGGCATCCAAATGTCGTCGGTTTGAGAGGTTATTATTGGGGTCCTACGCAGCATGAGAAGCTTATTCTTTCAGATTACATTTCACCAGGAAGTCTTGCAAGTTTTCTTTATGATCGACCTGGAAGAAATGGTCCGCCATTAACATGGGCTCAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGACCGAGCTGTTCCTCATGGAAACCTTAAAGCTACAAATGTGTTGTTAGATACATCTGATATGAATGCACGCGTAGCCGATTATTGTCTTCACCGACTTATGACTCAGGCTGGGACAATCGAACAGATTCTTGATGCTGGTGTCTTAGGTTATCGTGCACCAGAGTTAGCTGCTTCCAAAAAGCCAATGCCATCATTCAAGTCAGATGTCTACGCTTTCGGCGTGATACTCTTGGAACTTTTATCCGGAAGGTGTGCTGGCGATGTAATATCTGGTGAGGAAGGAGGTGTTGATCTTACAGATTGGCTAAGATTACGAGTAGCAGAAGGTCGAGGCTCAGAATGTTTTGATGTGACTTTGATGTCGGAAATGGGAAATCCAGTTGTAGAAAAGGGAATGAAAGAAGTCCTAGGAATAGCAATTCGATGCATTCGATCGGTTTCTGAAAGGCCTGCAGCTGCACTGAACTCACCTTGCCGGAAAACGAAGACGGAGTTCCTCGTCGGCTGCCACAAACAGTGTGAAGGGAATCTTGATTCGGAAAATGATGACATCTCAAAAATCGAGATAAATGAGGAATATGCTCGTAGGTTTGAGCACAACAAGAGGCGAGAGGATCTCCATCGTTTTGAAGAATTAAAAAAGAAGGGTGCTATTGATTCACCCTTGTTATCTGAAGATGATGAATCTGACTCCGAATCATCTGATGATGACTATGAAGAAAATTTCAATTCGAGAAGTGAAAAGGAATTCTTTGATGCCTTAATTAAGGTGAAGAAGAAAGATCCTGTTCTAAAGCAAAAAGATGTTAAGCTTTTTGAATCTGATCATAGCAGTGATGAAGAGAACAGTAAATCAAAAGATAAGAAGACCAAAAAGGCAATGTATTTGAAGGATGTGATGGCAAAGCATTTGATTGAGGAGGGACCAGATTTTGGTGATAAAGAGGAAGAATACAATGAAAAACAGAAAGGGATAACAAGTAAGGGTAAGAAGGCAATGTCTTTGATTCAGGAGGAAGCAGGTTTTGTGAATAAAGATGGGAAGAAGACTTACGGTGATGAACAAGAGGAGTTGAAAAGGGCTTTTCTGGAAGCAGTAGAAAAGGAGGGTTTGGAAGATGGTGAAGGGGATTTTCTCACCTTAAAGGAGAAGACAAGTGAGGAAAAAGTAGACGGTGATGACAAGGAATTTGAGGAGAAACTGGATGAATATTTTGGTGGAGATGCAGAATCAAACGAAAGTTCTAGATTTCTAAGAAACTATTTCAGGAACAAAATGTGGATAGACAAGAATGTGGAGAATTCAAATGTTGGAGATGAAGATTTGCAAGAGATTTCAGAGGATGAGATGGAAATTGAGAGGCAGGAAGAATATGAGCATAGATTTCAGGAAAATCCGGGAGATAGAGTGTTGGGTCATGCTCGTAAGGTGGAGGGGTCAGTGAGGAAAAAAACAAATTCaaggaaagagcagagaaagagcaaagaggagagaatggcaatagcacaaaaggaaagggaggaggaGTTAAAACATTTAAAGAATGTGAAGAAGCAGGAGATACAGGAGAAGGTTAAAAAGATAATGAAGACTGCAGGGATCGATGATGATGATATTATCCCTTTGTCTGTTGCAGAATTAGAAGAGGAATTTGATCCAGAGGAGTATGATAGAATGATGAAGAAAGCATTTGATGATAAGTATTATGATGCAGAGGATGCTGACCCTGATTTCTGTAGCGAGGATGAAGAAGATCTGGAGAAGCCAGATTTTGAAAAAGAGGATGAATTACTTGGGCTTCCTAAAGACTGGGATGCATGTGGGTCCGACGGTGGGTTTTTGGCTGCAAGAGAAAAAGCATTGAAAGAAAAGATCGAGAATACTAGTGATGATGATGATCTAATGGAAAAAGAAAATGAAACAGAGAAAAATCCTGAGGAAGGTAGTAGTCGGAAGAGGAAGCGTAAAACAGCACTTTTGGAGAAAGCAAGACAGGCAATGATGGATGAGTACTATAAATTAGATTACGAGGACACAATTGGGGACCTGAAGACTAGATTCAAGTATGCCAAAACAAAGCCTAACAAATTTGGCATTACTGCTCCGGAGATACTATTGATGGATGACAAGGAATTGAATCAATATATTTCCTTGAAAAAACTTGCTCCTTACCAGGAGGAGGAATGGAAGCTTAGCAAACAAAAGAAATACATGCTGAAGACGAGGGCTAAGGAGCTCCTTCGTGCAGCAAGTTTGGATAAGAAGAAAAATAAGAAGTCAAAGGTTGATTCTAGCAAGAAATCGAAGGTCGATTCTAGCAAGCCTACAAAGGTCGAGTCTAGCAAGCCTACAAAGGTCGAGTCTAGCAAGTCTACAAAGTTTGAGTCTAGCAAGTCAACTTCAGCAAACAATGTTGTGGAGGATGAAAAAGCAAACAATGTTGTGGAGGATGAAAAAGCAAACACAGAAAAATCAAATTACTGGTTTAACCAGTATGGGACCAGCTAA 5211 0.3976 MKLFTLLVLFLSFFSIMGQLPSQDILALLEFKKCIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSVFSNLSKLVKLSMANNSISGKLTNNVADFKSLQFLDISNNLFSSSIPSGIGKFDSLQNLSLAGNNFSGPIPNTISEMASIESLDLSRNTLSEALPPSLTKLNSIVSLNLSHNGFTGKIPKGFELISSLEKLDLHSNMLDGPLDVEFMLLSGASYVDLSDNLLVSSDSGKFLPRISESIKYLNLSHNQLTGSLVGGAEQPVFQNLKVLDLSYNQLNGELPGFDFVYDLQVLKLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPLSMITSTTLHSLNLSSNGFTGELPLLTGSCAVLDLSNNKFEGNLTRMLKWGNVEYLDLSRNHLAGNIPEVTPQFLRMNYLNLSHNDLSHDLPRVLTQYPKLRVLDISSNQFKGLLLPDFFTMQTLQELHLEDNLISGSINLSSSLDQSHLQVLDLSHNQLTSFFPDDLGSLTSLKVLNIAGNSFVGSLPTTIADLSSLDSLDISDNHFTGPLPNNMPKGLKGFNASNNDLSGVVPETLRKFPSSSFFPGNAKLHFPNSPPGSTLSPTESSEGKKSMTTVVKVIIIVSCVVALFILILLAVFIHYIRMSRSPTPEYDTGKDIRGRSQPVISGPVRSTERGGALVVSAEDLVASRKGSPSEIVSPDEKVAAVAGFSPSKHSHFSWSPGSGDSLTAENLSRLDTRSPDRLIGELHFLDDSISLTPEELSRAPAEVLGRSSHGTSYKATLDNGLLLRVKWLREGVAKQRKEFVKEIRKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRNGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTSDMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLSGRCAGDVISGEEGGVDLTDWLRLRVAEGRGSECFDVTLMSEMGNPVVEKGMKEVLGIAIRCIRSVSERPAAALNSPCRKTKTEFLVGCHKQCEGNLDSENDDISKIEINEEYARRFEHNKRREDLHRFEELKKKGAIDSPLLSEDDESDSESSDDDYEENFNSRSEKEFFDALIKVKKKDPVLKQKDVKLFESDHSSDEENSKSKDKKTKKAMYLKDVMAKHLIEEGPDFGDKEEEYNEKQKGITSKGKKAMSLIQEEAGFVNKDGKKTYGDEQEELKRAFLEAVEKEGLEDGEGDFLTLKEKTSEEKVDGDDKEFEEKLDEYFGGDAESNESSRFLRNYFRNKMWIDKNVENSNVGDEDLQEISEDEMEIERQEEYEHRFQENPGDRVLGHARKVEGSVRKKTNSRKEQRKSKEERMAIAQKEREEELKHLKNVKKQEIQEKVKKIMKTAGIDDDDIIPLSVAELEEEFDPEEYDRMMKKAFDDKYYDAEDADPDFCSEDEEDLEKPDFEKEDELLGLPKDWDACGSDGGFLAAREKALKEKIENTSDDDDLMEKENETEKNPEEGSSRKRKRKTALLEKARQAMMDEYYKLDYEDTIGDLKTRFKYAKTKPNKFGITAPEILLMDDKELNQYISLKKLAPYQEEEWKLSKQKKYMLKTRAKELLRAASLDKKKNKKSKVDSSKKSKVDSSKPTKVESSKPTKVESSKSTKFESSKSTSANNVVEDEKANNVVEDEKANTEKSNYWFNQYGTS 1736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00848 1736 MobiDBLite consensus disorder prediction 1169 1192 - -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1525 1559 - -
Car01g00848 1736 Pfam Leucine rich repeat 502 562 IPR001611 GO:0005515
Car01g00848 1736 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Car01g00848 1736 Pfam Leucine rich repeat 406 465 IPR001611 GO:0005515
Car01g00848 1736 MobiDBLite consensus disorder prediction 667 688 - -
Car01g00848 1736 PANTHER OS07G0626500 PROTEIN 4 1052 - -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1208 1228 - -
Car01g00848 1736 Pfam Protein tyrosine and serine/threonine kinase 785 982 IPR001245 GO:0004672|GO:0006468
Car01g00848 1736 MobiDBLite consensus disorder prediction 1650 1693 - -
Car01g00848 1736 SUPERFAMILY L domain-like 43 378 - -
Car01g00848 1736 Gene3D Phosphorylase Kinase; domain 1 775 858 - -
Car01g00848 1736 MobiDBLite consensus disorder prediction 606 625 - -
Car01g00848 1736 PANTHER - 4 1052 - -
Car01g00848 1736 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1124 1138 - -
Car01g00848 1736 ProSiteProfiles Leucine-rich repeat profile. 503 526 IPR001611 GO:0005515
Car01g00848 1736 SUPERFAMILY L domain-like 289 585 - -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1539 1559 - -
Car01g00848 1736 ProSiteProfiles Protein kinase domain profile. 781 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00848 1736 MobiDBLite consensus disorder prediction 610 625 - -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1208 1231 - -
Car01g00848 1736 ProSiteProfiles Leucine-rich repeat profile. 291 313 IPR001611 GO:0005515
Car01g00848 1736 SMART LRR_typ_2 312 336 IPR003591 -
Car01g00848 1736 SMART LRR_typ_2 289 311 IPR003591 -
Car01g00848 1736 SMART LRR_typ_2 502 525 IPR003591 -
Car01g00848 1736 SMART LRR_typ_2 165 189 IPR003591 -
Car01g00848 1736 SMART LRR_typ_2 452 476 IPR003591 -
Car01g00848 1736 SMART LRR_typ_2 549 573 IPR003591 -
Car01g00848 1736 SMART LRR_typ_2 117 141 IPR003591 -
Car01g00848 1736 Pfam Leucine Rich repeat 290 305 IPR001611 GO:0005515
Car01g00848 1736 Pfam Leucine Rich repeat 360 376 IPR001611 GO:0005515
Car01g00848 1736 Coils Coil 1393 1424 - -
Car01g00848 1736 Pfam KRI1-like family C-terminal 1566 1647 IPR024626 -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1694 1709 - -
Car01g00848 1736 Pfam KRI1-like family 1398 1497 IPR018034 -
Car01g00848 1736 SUPERFAMILY Protein kinase-like (PK-like) 784 1024 IPR011009 -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1120 1144 - -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1366 1399 - -
Car01g00848 1736 MobiDBLite consensus disorder prediction 1650 1736 - -
Car01g00848 1736 Gene3D Ribonuclease Inhibitor 22 137 IPR032675 -
Car01g00848 1736 Gene3D Ribonuclease Inhibitor 138 189 IPR032675 -
Car01g00848 1736 Gene3D Ribonuclease Inhibitor 190 262 IPR032675 -
Car01g00848 1736 Gene3D Ribonuclease Inhibitor 263 617 IPR032675 -
Car01g00848 1736 Gene3D Transferase(Phosphotransferase) domain 1 860 1063 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00848 Car-Chr1 7498554 7508829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00848 407 984 Receptor kinase-like Gene Family AT1G67510 31.511 8.84e-66 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car01g00848 PK_Tyr_Ser-Thr 5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00848 - - gmx:100793639 1716.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00848 01 7498554 7508829 Car01g00848 01 7498554 7508829 ECH