Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00844 ATGGCTCATATCTGCCAATGTCTGACTCGATTGTTAACCTTCCGGCGAAATTTTCCGGTGACCATCGCCGGGAACCACTGCAAGAGCGGGGAAGAGTTTGTGGAGGAAGTGGTGTCACTAGCACATGGCCTTCTCCAGTTGGGAGTCACACCGGGTGATGTTGTCGCTATCTCTGCTTACAATAGTGATTGGTATCTGGAATGGTTGTTAGCCATTGCATTTGTTGGAGGAATTGCTGCTCCTCTGAATTATCGTTGGAGTTTTGAAGAGGCAAGGTTAGCAATGATATCAGTGAGGCCAGTTATGTTAGTGATTGATGAGAGCTGCTACTCATGGTACTTCAAATTCCAACAAATTGATATTCCATCTTTGAGGTGGCATGTTTTGTTGGATTCCCCTTCTTCAGATTTTACAAACAAGTTGAATGTGTTGACTCCAGGAATACTTAAGAAGCATCATGTAAAGCCTGTAGAATTCAATTACTACTGGGCACCTGAAGGAGCTGCAATAATATGCTTTACTTCAGGAACTACCGGAAAGCCCAAGGGAGTCACAATAAGCCATGAGGCTTTGATCATACAGTCCCTAGCCAAGATTGCAGTAGTTGGTTATAGTGAGGATGATATCTATCTTCATACTGCTCCATTGTGCCACATTGGTGGCTTGTCATCAGCCATGGCCATGCTCATGGTTGGAGGTTGCCATGTATTCATGCCAAAGTTTGATGCAAAATTAGTTGTTGGTGCCATAGAGCAATATAATGTGACATCTTTTATCACAGTTCCTGCAATAATGGCCGGTCTGATTTCTGTTGTTAGGCACAAAAAAACCTGGAAAGGGGAGGAAACTGTCAAGAAAATACTAAATGGGGGTGGAAGCCTCTCACTTGAGCTTATCAAAGACACTGGCATATTCTTCCATAAAGCTAAGCTTATTTCAGCTTACGGGATGACAGAAGCATGCTCTTCAATGACATTCATGACACTATATGATCCAATTCTAAAAACCACTAGCCATCCTTTTAAAACATATGGTGAGGTAGGATCCAATATCGTTCACCGGCCACAAGGTGTTTGTGTTGGCAAGGCTGCACCTCATGTAGAATTGAAGATATGCACAGATTCCTCTGGTGACATTGGGAGAATTTTAACCAGAGGACCGCATTTAATGCTAAGGTATTGGGATCAAGCTCTCACAATCCCATCAAATCATAGGAATGAAGTCTGGCTTGACACAGGTGACATTGGATCAATGGATTGTCATGGTAACTTGTGGCTCCTTGGACGTACTAATGGTCGGATCAAGAGTGGTGGGGAGAATATTTACCCTGAAGAGGTTGAGGCAATTCTACTAGAACATCCAGGGATAGCAAGTGTTGTTATTGTGGGAATACCAGATGATCGTTTCACAGAGATGGTAGCAGCATGTATCCAACCAAGAGAAAATTGGCTATGGTCAGAGCATTCTACTTCAAATGAAGAGTATCACTTATCTAGAAAGAATCTCCAGCAATACTGTTTAGAAAATAATTTAAGCAGGTTTAAGATACCAAAGATATTTATTGAATGGAGAAAGTCTTTTCCGATCACTACCACAGGAAAAATAAGAAGAGACCAAGTTCGAAAGGAAGTTATGTTTGAGCTACAATCTTTGCATAGTAATCTTTGA 1668 0.4185 MAHICQCLTRLLTFRRNFPVTIAGNHCKSGEEFVEEVVSLAHGLLQLGVTPGDVVAISAYNSDWYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMISVRPVMLVIDESCYSWYFKFQQIDIPSLRWHVLLDSPSSDFTNKLNVLTPGILKKHHVKPVEFNYYWAPEGAAIICFTSGTTGKPKGVTISHEALIIQSLAKIAVVGYSEDDIYLHTAPLCHIGGLSSAMAMLMVGGCHVFMPKFDAKLVVGAIEQYNVTSFITVPAIMAGLISVVRHKKTWKGEETVKKILNGGGSLSLELIKDTGIFFHKAKLISAYGMTEACSSMTFMTLYDPILKTTSHPFKTYGEVGSNIVHRPQGVCVGKAAPHVELKICTDSSGDIGRILTRGPHLMLRYWDQALTIPSNHRNEVWLDTGDIGSMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIASVVIVGIPDDRFTEMVAACIQPRENWLWSEHSTSNEEYHLSRKNLQQYCLENNLSRFKIPKIFIEWRKSFPITTTGKIRRDQVRKEVMFELQSLHSNL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00844 555 Gene3D - 432 547 IPR045851 -
Car01g00844 555 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Car01g00844 555 PANTHER ACYL-COA SYNTHETASE 3 544 - -
Car01g00844 555 Gene3D - 14 429 IPR042099 -
Car01g00844 555 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 3 544 - -
Car01g00844 555 CDD AFD_class_I 169 536 - -
Car01g00844 555 Pfam AMP-binding enzyme 28 436 IPR000873 -
Car01g00844 555 SUPERFAMILY Acetyl-CoA synthetase-like 4 545 - -
Car01g00844 555 Pfam AMP-binding enzyme C-terminal domain 445 534 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00844 Car-Chr1 7462979 7468183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00844 37 542 Monolignol Biosynthesis Gene Families AT4G19010 27.135 1.02e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00844 K14760 - gmx:100809925 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00844 01 7462979 7468183 Car01g00844 01 7462979 7468183 ECH