Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00830 ATGAACTCTTCTCTTCATCTCACATTCACAGCTTTATGGTGTGTAGTGGTTGTTCTTGGAGGGTTACCCTTCTCTTCAGATGCACAACTTGATCCATCCTTTTATAAGGACACTTGTCCTAATGTTCATTCCCTTGTTCGTGACGTTATAAGGAATGTTTCTAAGACAGATCCTCGTATCCTTGCTAGTCTCATCAGGCTTCATTTTCATGATTGTTTTGTTCAAggttgtgatgcatcaatcttattaaatgacacttcaacaatagtgagtgaacaaggagcattcccaaataacaactcaataagaggtttggatgttgtgaatcgaattaaaactgcggtggaaaatgcttgtcctaacatagtctcttgtgctgatattcttgcacttgctgcTCAAATTTCCTCTGTTTTGGCTCAAGGTCCTAATTGGAAAGTTCCATTAGGAAGAAGAGATAGTTTAACAGCAAACCAATCTCTTGCTAATCAAAATCTTCCAGGTCCTTCTTTCAACCTTACTCGACTAAAATCTGCTTTTGCTGCTCAAGGTCTCAACACAACTGATCTAGTTGCACTTTCAGGTGCTCATACAATTGGTAGAGGCCAATGCAAATTCTTTGTTGATCGATTATATAATTTTAGCAGTACTAACAATCCTGATCCAACTCTCAACACAACCTACTTACAAACACTACAAGCAATATGTCCAAACGGTGGACCTGGTACCACTCTTACCAATTTGGACCTAACCACTCCTGATACATTTGACTCTGCCTACTATTCCAATCTTAAAATTCAAAAGGGATTGTTTCAGAGTGACCAAGAGTTGTTTTCAACCAGTGGTGCAGACACTATTGACATTGTCAATAGTTTCAATGACAACCAAACTCTTTTCTTTGCAAACTTTAAGGCCTCTATGATTAAAATGGGTAATATTAATGTGTTAACTGGATCTCAAGGAGAAATTAGACAACAATGTAACTTTATTAATGGAAACTCTGTTGACCTTGCTACTACTGTGACTAGAGAGTCGTCAGAAGATGGCATCGTTAGTTCATACTAA 1065 0.3183 MNSSLHLTFTALWCVVVVLGGLPFSSDAQLDPSFYKDTCPNVHSLVRDVIRNVSKTDPRILASLIRLHFHDCFVQGCDASILLNDTSTIVSEQGAFPNNNSIRGLDVVNRIKTAVENACPNIVSCADILALAAQISSVLAQGPNWKVPLGRRDSLTANQSLANQNLPGPSFNLTRLKSAFAAQGLNTTDLVALSGAHTIGRGQCKFFVDRLYNFSSTNNPDPTLNTTYLQTLQAICPNGGPGTTLTNLDLTTPDTFDSAYYSNLKIQKGLFQSDQELFSTSGADTIDIVNSFNDNQTLFFANFKASMIKMGNINVLTGSQGEIRQQCNFINGNSVDLATTVTRESSEDGIVSSY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00830 354 Gene3D Peroxidase, domain 2 167 310 - -
Car01g00830 354 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 ProSiteProfiles Plant heme peroxidase family profile. 29 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PANTHER PEROXIDASE 72-RELATED 9 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 Pfam Peroxidase 46 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PANTHER PEROXIDASE 9 339 - -
Car01g00830 354 Gene3D - 34 331 - -
Car01g00830 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Car01g00830 354 CDD secretory_peroxidase 29 330 IPR033905 GO:0004601|GO:0042744
Car01g00830 354 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g00830 354 SUPERFAMILY Heme-dependent peroxidases 29 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00830 Car-Chr1 7281342 7283739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00830 15 334 Peroxidase AT5G06730 59.688 1.52e-134 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00830 K00430 - gmx:111064645 565.459