Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00804 ATGGTGATGTCGGAGTTGGACGGAGAAGAGCTTGTCACCGTCGACGTCGAGTCTCAACCTCGACAAGAAGAAGCAGAAGATGAACATCACTTAACGATGGACGATACTTCTATGTGCTGCGAACAATTACAGGATGGAGAATGCATTGAGATTATGAAAGACGAAGATGGTGCACTAGTTGGATTGGATTGTCAAAATGATCTTTCTGAAGGAAGAAAAGATTTTGTTGCACCTGCTgttggaatggagtttgagtcatatgaagatgcttacaattattatatctgctatgccaaagaagtaggatttcgtgtGAGAGTGAAGAATTCATGGTTCAAGCGAAATAGCAGAGAAAAATATGGTGCAGTGCTTTGTTGTAGCAGCCAGGGTTTCAAAAGAATAAAAGATGTTAGCAATTTGAGAAAGGAGACAAGAACTGGTTGTCCTGCGATGATAAGGATGAGGTTAGTGGAGTCTCAAAGATGGAGGATACGTGAGGTTACCCTCGAACATAACCACATCTTGGGTGCTAAGACACATAAATCAGCTAAAAAGATGGGAAGTGGAACTAAAATGAAGTTGTTGCCTAGTTCTGATGCTGAGGTGCAAACAGTTAAGTTATATCGTGCACTAGTGATAGATGCAGGAGGTAATGGAGTTTCGAACTCCAATGCAAGAGACGACAAGATTTTCTCTGAATATTTTAATAAGTTGAGCCTAAGAAAAGggcaattgaggaatgcattttgggctgatggcaggtccagggctgcatgtggttattttagtgatacttctttgaaggagtttcttgacaagtatgaATTAGCTCTTCACAAGAAGTTAAAGGAAGAATCTTCGGCAGATATTGAATCAAGAAGCTCAAACCCCTTGCTGAAAACCAAATGTTCTTTCGAACTTCAGCTCTCTAGAATGTACACAAAAGAAATATTCAGGAAGTTTCAATTCGAAGTGGAAGAAATGTTCTCTTGTTTTGGTACAACACAGTTACATGTGGATGGTCCCATCATAATTTTCCTGGTCAAGGAGCGCATTATGATCGAGGGAAACAAACGGGAGATTAAGGATTTTGAAGTTCTGTACAGTAGAACAGCAGGTGAAGTTCGTTGCATATGTTGTTGCTTTAATTTTTATGGATATCTATGTCGGCACGCACTGTGTGTGCTCAATTTTAACGGGGTGGAAGAGGTGCCTCCAAAGTACATTCTTTCGCGGTGGAAGAAAGATTACAAGCGCCTTTATATTCCTGATCACAGCTCTGGTAGTTCTGATGATACTGACAGTATTCAATGGTCTAATAAGTTATTTAGAAGTGCCTTACAAGCTGTGGAAGAGGGGATAATTTCTCTGGATCATTATAATGTAGCGTTGCAGGCTTTTGAAGAATCACTTAATAAGGTTCATGATGTAGAACAGAGACAGGAGTAA 1449 0.354 MVMSELDGEELVTVDVESQPRQEEAEDEHHLTMDDTSMCCEQLQDGECIEIMKDEDGALVGLDCQNDLSEGRKDFVAPAVGMEFESYEDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVSNLRKETRTGCPAMIRMRLVESQRWRIREVTLEHNHILGAKTHKSAKKMGSGTKMKLLPSSDAEVQTVKLYRALVIDAGGNGVSNSNARDDKIFSEYFNKLSLRKGQLRNAFWADGRSRAACGYFSDTSLKEFLDKYELALHKKLKEESSADIESRSSNPLLKTKCSFELQLSRMYTKEIFRKFQFEVEEMFSCFGTTQLHVDGPIIIFLVKERIMIEGNKREIKDFEVLYSRTAGEVRCICCCFNFYGYLCRHALCVLNFNGVEEVPPKYILSRWKKDYKRLYIPDHSSGSSDDTDSIQWSNKLFRSALQAVEEGIISLDHYNVALQAFEESLNKVHDVEQRQE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00804 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 264 479 IPR031052 GO:0006355
Car01g00804 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 216 IPR031052 GO:0006355
Car01g00804 482 MobiDBLite consensus disorder prediction 1 30 - -
Car01g00804 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 242 264 - -
Car01g00804 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 264 479 - -
Car01g00804 482 MobiDBLite consensus disorder prediction 14 30 - -
Car01g00804 482 Pfam FAR1 DNA-binding domain 92 175 IPR004330 -
Car01g00804 482 ProSiteProfiles Zinc finger SWIM-type profile. 364 400 IPR007527 GO:0008270
Car01g00804 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 242 264 IPR031052 GO:0006355
Car01g00804 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 52 216 - -
Car01g00804 482 SMART 26again6 375 402 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00804 Car-Chr1 6928401 6932231 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car01g00804 FAR1 2.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00804 - K17604 gmx:100796448 382.104