Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00799 ATGGATTTGTCTGGTCAGCTTTCTGCAGATATTGGATTACTATCTGAATTGCAGATTTTGGTTCTGTCCTACAATAAGAATTTAACAGGACCACTTCATGCTGAAATTGGAAACTTGAAAAAGCTGACAAACTTACAACTTATTAATTGTGGTTTCATTGGTCCTATCCCAGATACAATAGGAAATCTACAAAGGCTTGTTTTCTTATCATTAAATTCTAATAGATTCAGTGGGAAAATTCCACCTGCTATTGGTAATCTCTCAAGTATTTATTGGCTAGACTTAGCAGAAAATCAGCTTGAAGGCCGCATTCCAATATCTAATGGAACTACTCCTGGTCTTGATATGTTGCACAAAACAAAACACTTTCATTTTGGGCGGAATAAGCTTTCAGGAAATATTCCACCTCAACTTTTTAGCTCTCAAATGTCTTTGATACATGTCCTTTTTGAAAGTAACCAATTTACTGGCAGCATTCCATCAACACTTGGACTTGTCCAGCACCTTGAAGTAGTGCGCTTGGATCACAATTTTTTAGGTGGACCTTTGCCTAAAAACATCAACAATCTTACAAAAGTTAGGGAATTGTTCCTGTCGAACAATCGCATAACTGGTCCCTTACCAGACCTTACTGGAATGAATGTCCTCAGCTACCTGGATATGAACAATAACAGTTTTGATCAATCCGAATTTCCACCTTGGTTGTCAACTCTACAATCTCTAACAACAATAATGATGGAGAATATACAACTTCAAGGACTTATTCCTGTTTCTTTGTTCAGCCTAGAACAGTTACAAACAGTGATGCTGAAAAACAACCAGCTGAATGGAACTTTGGATATTGGCACATCCATTAGTGACCAACTGGGAGTCCTTGATTTACAGACTAATTTTATTGAAAATTTTGATCCACAAATTGATGTCTCTAAAGTTGAGATAATACTTGTGGAAAATCCAGTTTGCCAAGACGCAGGAGTTGTAAAAACTTACTGCTCCATTACAAAAACCAACGACTCGTATACAACACCGACAAATAACTGTGTGCCGATTACCTGCACCTCAAATCAGATATTAAGCCCAAAATGCAAATGTGCATATCCATATACAGGAACTTTAACCCTTAGAGCTCCTTCCTTCTCAGACTTGGGAAACAAGACTGTTTTTGCAATGCTGGAGTACACTCTAATGGAATCTTTTAGAAATCATGACAAACCTGTTGATTCAGTTTCTTTAAGCAATCCAAGGAAGAATGTATATCAGTATCTTGATTTGAATTTAGAAATATTTCCATCAGATCAAGTTTCTTTTGATAGAACCGCGATTTCTGGCATAGGCTTTATTCTTAGCAACCAAACATACAAGCCTCCTCCAATTTTTGGACCATTTTATTTCATTGCTGATAAGTATGAACACTATCTGAATGATTCGGTAATAGCAGGTCATGTGCCATCTAGTAAATCTTCAAATATTGGCATCATAGCTGGAGCTGCTATTGGGGGTTCGGTCATGTTGGTGTTACTACTCCTTGCAGTTGTTTATGGTTTTCGCCAAAAGAACAAGGCAAGAAGAGCAAAGAAGAAAAGCAACCTTTTTGAACAATGGGGTCCTGATGAGAGCAATAGTAGCATCCCACAGTTAAAAGGAGCAAGGCGCTTCTCTTTCGATGAGATTCAGAACTACACCAAAAAATTTGCACAAGTCAATTATGTAGGAGCTGGAGGTTATGGAAAGGTTTATAGGGGAACTCTTCCCAATGGGCAACTAATTGCAGTAAAAAGAGCTCAAAAGGAATCAATCCAAGGAGGGCTAGAGTTCAAAACAGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTTATTGGTTTTTGCTTTGAGCAAGGAGAACAAATACTGGTTTATGAGTATGTTGTAAATGGTACTTTGACAGATGCTCTTTTAGGGAAGTCAGGAATTAGATTGGACTGGATTAGAAGGCTTAAAATTGCCCTTGGTGCTGCTAGGGGGCTGGATTATCTACATGAACTTGCCAATCCTCCTATCATACATAGAGATGTTAAATCTACAAACATTTTACTCGACGAACGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTGGGTGATGGTGCAAAAGGATATATTACAACTCAAGTCAAAGGGACAATGGGCTACTTGGATCCAGAGTATTACATGACTCAACAATTGACTGAGAAGAGTGATGTTTATAGCTTCGGAGTGCTAATGTTAGAGTTGGTAACTGCAAGAAGGCCAATCGAAAGAGGGAAATATATTGTGAAAGTTGTTAAGAATGCGATTGACAAAACAAAAGAATTATATGGTCTTACGGAAATCCTTGATCCTGTCATTGATTTGAGGACATCATTGAACAGTTTCGAAAAATTTATGGATCTTGCAATGCAATGTGTTGAAGAGTCAAGTTCAAACAGACCATCAATGAACTATGCATTGAAAGAAATTGAAAACATGTTGCTATTGGCTGGCTCAAACCCTAATGCTGAATCAGCACCTACTTCATCTAGTTATAATGCAAGTGGAAATTCTATGCATCCTTATGATAATGAGTACTTTGATTCAAGTGTTGTACTTCCACGTGCATAA 2640 0.3773 MDLSGQLSADIGLLSELQILVLSYNKNLTGPLHAEIGNLKKLTNLQLINCGFIGPIPDTIGNLQRLVFLSLNSNRFSGKIPPAIGNLSSIYWLDLAENQLEGRIPISNGTTPGLDMLHKTKHFHFGRNKLSGNIPPQLFSSQMSLIHVLFESNQFTGSIPSTLGLVQHLEVVRLDHNFLGGPLPKNINNLTKVRELFLSNNRITGPLPDLTGMNVLSYLDMNNNSFDQSEFPPWLSTLQSLTTIMMENIQLQGLIPVSLFSLEQLQTVMLKNNQLNGTLDIGTSISDQLGVLDLQTNFIENFDPQIDVSKVEIILVENPVCQDAGVVKTYCSITKTNDSYTTPTNNCVPITCTSNQILSPKCKCAYPYTGTLTLRAPSFSDLGNKTVFAMLEYTLMESFRNHDKPVDSVSLSNPRKNVYQYLDLNLEIFPSDQVSFDRTAISGIGFILSNQTYKPPPIFGPFYFIADKYEHYLNDSVIAGHVPSSKSSNIGIIAGAAIGGSVMLVLLLLAVVYGFRQKNKARRAKKKSNLFEQWGPDESNSSIPQLKGARRFSFDEIQNYTKKFAQVNYVGAGGYGKVYRGTLPNGQLIAVKRAQKESIQGGLEFKTEIELLSRVHHKNLVSLIGFCFEQGEQILVYEYVVNGTLTDALLGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDVKSTNILLDERLNAKVSDFGLSKPLGDGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIERGKYIVKVVKNAIDKTKELYGLTEILDPVIDLRTSLNSFEKFMDLAMQCVEESSSNRPSMNYALKEIENMLLLAGSNPNAESAPTSSSYNASGNSMHPYDNEYFDSSVVLPRA 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00799 879 CDD STKc_IRAK 570 836 - -
Car01g00799 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 684 696 IPR008271 GO:0004672|GO:0006468
Car01g00799 879 Pfam Protein kinase domain 566 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00799 879 Gene3D Ribonuclease Inhibitor 211 359 IPR032675 -
Car01g00799 879 SUPERFAMILY L domain-like 4 317 - -
Car01g00799 879 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 861 - -
Car01g00799 879 Gene3D Phosphorylase Kinase; domain 1 536 639 - -
Car01g00799 879 SMART serkin_6 564 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00799 879 SUPERFAMILY Protein kinase-like (PK-like) 550 868 IPR011009 -
Car01g00799 879 PANTHER - 1 861 - -
Car01g00799 879 ProSitePatterns Protein kinases ATP-binding region signature. 570 592 IPR017441 GO:0005524
Car01g00799 879 ProSiteProfiles Protein kinase domain profile. 564 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00799 879 Gene3D Transferase(Phosphotransferase) domain 1 641 848 - -
Car01g00799 879 Gene3D Ribonuclease Inhibitor 110 210 IPR032675 -
Car01g00799 879 Gene3D Ribonuclease Inhibitor 1 109 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00799 Car-Chr1 6902436 6910111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00799 1 879 Receptor kinase-like Gene Family AT5G49760 56.738 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Car01g00799 Pkinase 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00799 - - gmx:100780344 1360.51