LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car01g00796	atggcggcatcagcaacttctcttctccgccttccttctctttctctCTGGAATAAAGATTTGATTCCTGAAAGACGCAATACATTCTACAGGAAAAATAATCTTGACATCACAGCTCTCGCAGGGAGTTCTCTGGGAAAATCAGCTACGCGGCTCACGGCTGTTTCATTTCCACCAAATACCGATAACCATGGTCACCTCTCACTAAGTGTTCCCATGTCTCGAAGATGCGGTTTGAGTACCCGTCCGCAAGCATATATATATCATTGGTCTGGCTTTCGAATTCCTGCAAATGCTGAGAAGCCAGAATGGTGGTGGAGGACTTTATCCTGTATACCCTATCTAATAGCATTGCAGATGTCTGCAACTGGGTTTTATCTAGAACCTTTGCTTGAAAAATTCCGATTATTCGAAAATGTGATCTTTTATATCCCAGGAGCTGTAAACCGATTGCCAACATGGTTCCCTATATTATACTGCTATTTGGCTATCGTGGTAGTCGTAAAAAATAAGGACTTCCCCCTTATCTTCAGATTCCATGTAATGATGGGAATGTTACTGGAAATAGCTCTGCAGATAGTATGGGTTGCAAGCAATTTCATGCCACTTATACACTTCAAGGGGACACTTGGGATGTATTACTGGGCTGCTGTCGCATTGGCCTATATTATCATAACCATGCATAGCATCAGGTGTGCTCTTCTTGGTACGTTTTCGAACATCCCTGTTATTAGTCAATCGGCTTTCCTTCATTCTCTATTTAGTTTAGGTGGGTTCCAGCGGCCTTTTTAG	792	0.3977	MAASATSLLRLPSLSLWNKDLIPERRNTFYRKNNLDITALAGSSLGKSATRLTAVSFPPNTDNHGHLSLSVPMSRRCGLSTRPQAYIYHWSGFRIPANAEKPEWWWRTLSCIPYLIALQMSATGFYLEPLLEKFRLFENVIFYIPGAVNRLPTWFPILYCYLAIVVVVKNKDFPLIFRFHVMMGMLLEIALQIVWVASNFMPLIHFKGTLGMYYWAAVALAYIIITMHSIRCALLGTFSNIPVISQSAFLHSLFSLGGFQRPF	263

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car01g00796	263	PANTHER	PROTEIN TIC 20-IV, CHLOROPLASTIC	19	263	-	-
	Car01g00796	263	Pfam	Chloroplast import apparatus Tic20-like	83	248	IPR005691	-
	Car01g00796	263	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	19	263	IPR005691	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car01g00796	Car-Chr1	6869111	6871485	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car01g00796	94	262	Chloroplast and Mitochondria Gene Families	AT4G03320	57.988	1.68e-75	229

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car01g00796	-		-	mtr:MTR_5g024800	380.178