Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00793 ATGGGCTCGGAGAATGAAATTTCTCCGGCCGATGCTCATAGGGCTCCCGGAAAAGAACAACAAGCCGCCGGTGTCGGAATTCTTCTTCAGATCATGATGTTAGTCTTGTCGTTCGTTCTAGGTCACGTTCTCCGTCGTAAAAAGATTTACATCATTCCCGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGTGTTTTAGCTAACATTTCAAATACTGAAACTAATATCAGGGCTTGGTTCAATTTTCATGAGGAGTTTTTTTTCTTGTTCCTGTTGCCTCCAATTATATTTCAGTCTGGTTTCAGTCTTGCACCTAAACCTTTTTTCTCAAATTTTGGTGCAATTGTGACATTTGCTATATTTGGTACCTTTCTAGCTTCAATTGTAACTGGTGTTTTGGTTTATCTTGGTGGGTTGGTCTTCCTCATGTATAAACTACCTTTTGTTGAGTGCCTCATGTTTGGTGCTCTTATATCAGCTACTGATCCTGTTACTGTTTTGTCCATTTTTCAGGAGCTGGGCACAGATGTCAATCTATATGCTTTAGTTTTCGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATTGGTTAGAAGTCATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCTCTGTCTGCAGGTGTTGGTGTTGGGTTTATATCTGCTTTGCTATTTAAGTATGCAGGGTTGGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTCTTCCCATATTTCTCGTACATGCTGGCCGAAGGACTTGGTCTGTCTGGTATTGTATCAATATTATTCACAGGAATTGTCATGAAGCACTATGCGTATTCAAATTTGTCACAAAGTTCTCAGAAATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAAACATTTGTATTTATATACATGGGCTTTGACATTGCTATGGAACAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATTATGTTCATTGGAATTGCAAGAGCTGCAAATGTCTTTTCTTGTGCTTACCTGGTCAATCTGGCCAGACCTGATCATCGAAAGATACCTCTGAAACACCAAAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCGTTTGCTCTTGCTCTGCAATCAGTTCACGATCTTCCAGAAGGACATGGACAGACCATCTTCACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTCATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTCGTAGGTGGTGATGACAATCTCAACGATAGCTCTTTGGCTTCACTTGGTCCCACGGCAGTAAGTTTTGCAACAAATGATGTACTTAAGACTTTTTTGGTGTATTCTGTCACTACTAAGTTTCTTGTTTATGTGACTTTTGCATTGACATTGCATTTGGAAGTGACACCCATCATTAATGCTTTTGGACGACAAATTGCCAAATACAAATATGATCTGGGCTTGCTCCAAGATACTATATCTCATTTTTATACAGTGTCATTTTTCTTGTAA 1590 0.3956 MGSENEISPADAHRAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGVLANISNTETNIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFLASIVTGVLVYLGGLVFLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVRSHPSGQNFFMVVVRFLETFVGSLSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQKFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIMFIGIARAANVFSCAYLVNLARPDHRKIPLKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDDNLNDSSLASLGPTAVSFATNDVLKTFLVYSVTTKFLVYVTFALTLHLEVTPIINAFGRQIAKYKYDLGLLQDTISHFYTVSFFL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00793 529 Gene3D - 150 201 - -
Car01g00793 529 PANTHER SODIUM/HYDROGEN EXCHANGER 13 446 IPR018422 GO:0006812|GO:0015299|GO:0016021
Car01g00793 529 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car01g00793 529 PANTHER SODIUM/HYDROGEN EXCHANGER 6 13 446 - -
Car01g00793 529 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 31 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car01g00793 529 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car01g00793 529 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car01g00793 529 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car01g00793 529 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00793 Car-Chr1 6816897 6825787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00793 19 438 Antiporters AT3G05030 34.014 1.92e-54 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00793 K14724 - gmx:100790830 773.081