Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00783 ATGTATCATCCATCAAATGATCCTAATTCGAGTTTAATTGGAAGCAATTCATTAGTTCATGGTCAACACATAGATTGTGGTAGGAGTGCAATGGATCCTGGTAATGGAGGAAGCAATCTCGCCAACAACTCGAATCTCGCCTCAAAACAACGTTTACGGTGGACACATGAGTTACATGAACGCTTTGTTGATGCCGTGGCTCAACTCGGTGGGCCTGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTAACCATTTACCATGTTAAAAGCCATTTGCAGAAATACCGACTAGCAAAATACTTACCTGACTCCTCGTCCGATGAAGGGAAAAAGGCCGACAAGAAAGAAGCGGGAGATATGCTTTCCAATCTAGATGGTTCATCAGGAATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAAGTGCAGAAGCGACTACATGAACAGTTGGAGGTGCAGAGACAGCTACAGTTAAGGATAGAAGCTCAGGGTAAATATTTGAAAAAGATAATTGAAGAGCAACAGCGACTCAGCGGAGTTCTATCGGAAGCACCTGGTTCGGGAATTGCGGCCCCAACTCCAGGAGATATGTGCCAAGAACTTGACAATAAGAGTGATCCGGCTACTCCTGACCCGGAAAAAGCTGCTAAAGAGCACGCCCCAGCAAAAAGTCTTTCTGTTGAATCTTTTTCATCTCACCACGAACCGACGACACCAGATTCCGGTTGCCAACTCGTTTCACCTGCTGACAGTCCTGAAGGAGAGAGATCATCTAAAAAGCAACGAGTAAGTGTCGAAGGAACGTATTCTAAACAAGACATGGTGCTTCCACATCAGATACTGGAATCAAGCATGTCATCATACCAGCAACAGACCACTATTTTCCTTACGCAAGATCACTTTGATCCTTCTCTAGGTATATCGAGCGGAAGTGGCGAGGAAATGGACAAGCTTGGTGGCAGGAATATGTGA 990 0.4525 MYHPSNDPNSSLIGSNSLVHGQHIDCGRSAMDPGNGGSNLANNSNLASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKEAGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGSGIAAPTPGDMCQELDNKSDPATPDPEKAAKEHAPAKSLSVESFSSHHEPTTPDSGCQLVSPADSPEGERSSKKQRVSVEGTYSKQDMVLPHQILESSMSSYQQQTTIFLTQDHFDPSLGISSGSGEEMDKLGGRNM 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00783 329 MobiDBLite consensus disorder prediction 307 329 - -
Car01g00783 329 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Car01g00783 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 320 - -
Car01g00783 329 MobiDBLite consensus disorder prediction 212 227 - -
Car01g00783 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Car01g00783 329 MobiDBLite consensus disorder prediction 24 43 - -
Car01g00783 329 Coils Coil 139 159 - -
Car01g00783 329 MobiDBLite consensus disorder prediction 108 132 - -
Car01g00783 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 320 IPR044848 GO:0003700
Car01g00783 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Car01g00783 329 MobiDBLite consensus disorder prediction 188 278 - -
Car01g00783 329 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Car01g00783 329 SUPERFAMILY Homeodomain-like 48 103 IPR009057 -
Car01g00783 329 Gene3D - 48 107 - -
Car01g00783 329 MobiDBLite consensus disorder prediction 231 251 - -
Car01g00783 329 MobiDBLite consensus disorder prediction 108 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00783 Car-Chr1 6750968 6754516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00783 84 329 G2-like Transcription Factor Family AT2G01060 62.598 3.08e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car01g00783 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00783 - - gmx:100786925 522.316