Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00764 ATGGACTCGAAAACTAGTTCTAGATCTTTCTCAAAACAACAGCAGAAGACATCTGGGATTCAAACCCCTGAGGCGAAAGACCTCAAGTTTTCTTCACTGTCAATTCATAAGACAAGCAAACCTGAGCCGGCTGCTCCTGAAGATTTGTCTAGGTCTGTACAAAACACATTGAAGCAGAATATCGGGGATATTTCTGAAAGCAAGAAGTTTAATGCTTCAATCCAAAAAGGTTCTGGCGCTTCCTCATCCGCTCCTGGCAAAGCATCCGGAGAAGTGGACTGTGCTGTTAATGAGAACATAGGCTCACAGGGAAGCTCTATTGATCAAGACAAAAAGACATGGGAATATGGAAGTGTTAAGAACAGTTCGGTTTCCGCCAAAGCTAGCGACGGTGCCAGCAGTCTTGGAAAGACAAGTGGTAGTGCTAAGATCAGCGATCGAGCTGATTTTGTCGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGCGATGTGAGCGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCGTAAACAAGCCTCACAAGGCGAATGACATGAGATGGGAAGCTATCCAAGTGGTTAGAACTAGAGATGGAGCGTTGGGTTTAGGCCACTTTAGACTTTTGAAGAGATTGGGTTGTGGAGATATTGGCAGTGTATACCTCTCTGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTGATGGACAAAGGGTCCCTAGCAAGCCGTAAAAAGTTACTTCGTGCTCAGACGGAACGTGAAATTCTACAGTCACTTGACCACCCGTTTCTCCCAACTTTGTACACGCATTTTGAGACGGAGAAATTCTCATGCTTGGTGATGGAGTTCTGTCCTGGTGGAGACCTTCATACGCTTAGGCAGAAACAACCAGGGAAGCACTTTCCTGAGCAGGCAGTAAAATTTTATGTAGCCGAGGTCTTACTGGCAATGGAGTACCTCCACATGCTTGGGATTGTATACCGGGATCTTAAGCCAGAAAATGTCCTTGTTAGGGATGATGGACATATTATGCTTTCCGACTTTGACCTTTCCCTGCGATGTGCTGTTAGTCCAACCCTCGTTAAATCCTCATCCATAGATTCAGAGCCTTTAAGAAAGAATTCGGTTTACTGTGCTCAGCCTGCGTGTATTGAACCGCCTTCCTGCATTCAGCCATCCTGTGTTGCTCCTACCTCATGTTTTTCGCCCCGGCTCTTTTCTAGCAAATCAAAGAAGGACCGTAAACCCAAAACCGAACTCGGCAATCAAGTTAGTCCTCTGCCTGAGCTCATTGCAGAGCCTACCGATGCCCGGTCTATGTCGTTTGTTGGAACACACGAATACTTGGCGCCCGAGATAATCAAAGGTGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTATGGAATCTTTCTATATGAGTTGTTGTTTGGCAAAACTCCATTCAAGGGATCCGGGAACCGAGCCACACTGTTCAACGTGGTAGGTCAGCCCCTGCGATTTCCCGAAGCACCTGTTGTGAGCTTTGCAGCAAGGGATCTTATAAGGGGTTTGCTCGTAAAGGAACCTCAGCACAGATTGGCGTATAAAAGAGGTGCAACCGAAATCAAGCAACATCCCTTTTTCGAAGGTGTGAATTGGGCATTGATCCGATGTGCTACCCCTCCCGAGATTCCCAAGCCTGTTGAGTTTGAGAAGATACCTTCACCGGCTCCCTCCTCAGCCGGCGAAAAGGCTGTTGTTAATAACCACATGTCAACAGCATCTAATCAGAAAGGTTCTGATAATTATCTTGAGTTTGATTTCTTCTAG 1827 0.4609 MDSKTSSRSFSKQQQKTSGIQTPEAKDLKFSSLSIHKTSKPEPAAPEDLSRSVQNTLKQNIGDISESKKFNASIQKGSGASSSAPGKASGEVDCAVNENIGSQGSSIDQDKKTWEYGSVKNSSVSAKASDGASSLGKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDMRWEAIQVVRTRDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSSIDSEPLRKNSVYCAQPACIEPPSCIQPSCVAPTSCFSPRLFSSKSKKDRKPKTELGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEFEKIPSPAPSSAGEKAVVNNHMSTASNQKGSDNYLEFDFF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00764 608 CDD STKc_phototropin_like 208 571 - -
Car01g00764 608 MobiDBLite consensus disorder prediction 49 85 - -
Car01g00764 608 Gene3D Phosphorylase Kinase; domain 1 208 292 - -
Car01g00764 608 MobiDBLite consensus disorder prediction 1 95 - -
Car01g00764 608 PANTHER FLIPPASE KINASE 1-RELATED 3 608 - -
Car01g00764 608 ProSiteProfiles Protein kinase domain profile. 209 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00764 608 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 608 - -
Car01g00764 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Car01g00764 608 Pfam Protein kinase domain 210 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00764 608 Pfam Protein kinase domain 444 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00764 608 MobiDBLite consensus disorder prediction 1 38 - -
Car01g00764 608 Gene3D Transferase(Phosphotransferase) domain 1 441 565 - -
Car01g00764 608 Gene3D Transferase(Phosphotransferase) domain 1 293 358 - -
Car01g00764 608 SUPERFAMILY Protein kinase-like (PK-like) 183 574 IPR011009 -
Car01g00764 608 SMART serkin_6 209 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00764 Car-Chr1 6540079 6544534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00764 39 608 AGC Kinase Gene Family AT5G47750 78.336 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car01g00764 Pkinase 2.6e-36 CL0016