Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00759 ATGAATGAACAATTGGGGGTGCTAAAAGTAATAGTTGTGCAAGGGAAAAGGTTGGTGATCCgggatttcaagagcagtgatccttatgttgtgctcaaactagggaatcagACTGCAAAGACCAAGGTCATTAATAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTTTGACAGAACCTTTGGGAGTCCTGAATTTGGAAGTATTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTTATAAACCTTCAACCATTAGTCTCTGCAGCTAGATTAAGAGACATTTTAAGAGTCTCTTCAGGTGAGACAACATTAAGGAAGGTGATACCTGATAGTGAAAACTGTCTTGTCCGCGAAAGCAGTATCAATTGTGTTAATGGTGAGGTTGTGCAGAATGTTTGGTTACGGCTTTGTGAAGTCGAATCTGGTGAGCTAGAATTGACAATCAAGTTGATCACACCTGTTTCTAATGCTCCCTCAAAATAA 507 0.3531 MNEQLGVLKVIVVQGKRLVIRDFKSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFINLQPLVSAARLRDILRVSSGETTLRKVIPDSENCLVRESSINCVNGEVVQNVWLRLCEVESGELELTIKLITPVSNAPSK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00759 168 Gene3D C2 domain 1 116 IPR035892 -
Car01g00759 168 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Car01g00759 168 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 164 - -
Car01g00759 168 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Car01g00759 168 CDD C2_ArfGAP 5 150 - -
Car01g00759 168 Pfam C2 domain 7 99 IPR000008 -
Car01g00759 168 PRINTS C2 domain signature 22 34 IPR000008 -
Car01g00759 168 PRINTS C2 domain signature 46 59 IPR000008 -
Car01g00759 168 PRINTS C2 domain signature 67 75 IPR000008 -
Car01g00759 168 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
Car01g00759 168 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00759 Car-Chr1 6510852 6513379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00759 1 159 C2H2 Transcription Factor Family AT4G05330 45.283 4.90e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00759 - - gmx:100779624 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00657 07 5731418 5735624 Car01g00759 01 6510852 6513379 PCT