Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00755 ATGGACCTCTTCGCCGCTGAACACGTCGCTCCATTTCCCGACACCGGTGACCTTCTCTTCGCCGCCGGTCTCCTCTCCAACCACCACAATCCCCAAAAACTCCGCCCCATCAGGTCCCTCCCACCTCCCCCCGGTTACGTCGTCCATGCTGAGCTACCTCACAAGAACCTCGACACTCTAGAACCTTCCATCCACCCACTTCACCCGAATGGATCCGGGTCGGGTCATTCCCAACTGCCTCGCGTACACGAATCCAGCTCCTCGTTGGATGATGAAGATGATGTTGAAAATTCATCTGGAAGCACTAAAGAATTCGGCTCCAGAAAAAGAAGGAAAAAGACAGCGAGAAAGATTGAAGATTTTGTAGAAAATTTGGTAAAAAAGGTGATGGAAAAGCAAGAGCAGATGCATAACGAATTGATGGAAATGATAGACaagaaggaaaaggaaagaatacagagagaagaggcttggaggcgcgaggagatggaaagaattaagaaggacgaagaagCTAGAGCTCGAGAAAGGTCTCGTAATTTAGCCCTCATATCGTTCCTTCAGAAACTATCGGGTCATGAAATTCCGATTCCTCAACCAGCAGAAGAAAGCAGAAAAACAGAAGAGAATGAAACCGAGGTGAACAACAGAAAAGATTTCAACAGTGATCCAAGTAATAATAGATGGCCAGATGTGGAAGTACAAGCACTCATATCAGTAAGAACTTCATTGGAACACAGGTTTGGTCTAACGGGATCATCGAAAGGATCAATATGGGAGGAGATATCTGAAGCACTGCATGGCTTGGGATACAATCGTTCGGCGAAGAAGTGTAAGGAGAAATGGGAAAACATCAACAAGTACTATAAGAGGACGGTGGGGAGCGGCAAGAAACGGCCTCTAAATAGTAAAACTTGCCCTTACTTTGATGAATTGGACAATCTGTATAGAAATGGGACCTTAAGCATTGGAAATGCATTGAGCAATACCAACAGTGTTTCTAAGAATGAAGAAAAGGAGCAGTGTGAAATTTGA 1035 0.4184 MDLFAAEHVAPFPDTGDLLFAAGLLSNHHNPQKLRPIRSLPPPPGYVVHAELPHKNLDTLEPSIHPLHPNGSGSGHSQLPRVHESSSSLDDEDDVENSSGSTKEFGSRKRRKKTARKIEDFVENLVKKVMEKQEQMHNELMEMIDKKEKERIQREEAWRREEMERIKKDEEARARERSRNLALISFLQKLSGHEIPIPQPAEESRKTEENETEVNNRKDFNSDPSNNRWPDVEVQALISVRTSLEHRFGLTGSSKGSIWEEISEALHGLGYNRSAKKCKEKWENINKYYKRTVGSGKKRPLNSKTCPYFDELDNLYRNGTLSIGNALSNTNSVSKNEEKEQCEI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00755 344 MobiDBLite consensus disorder prediction 194 228 - -
Car01g00755 344 MobiDBLite consensus disorder prediction 59 114 - -
Car01g00755 344 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 77 341 - -
Car01g00755 344 Coils Coil 130 150 - -
Car01g00755 344 PANTHER - 77 341 - -
Car01g00755 344 SMART sant 225 288 IPR001005 -
Car01g00755 344 MobiDBLite consensus disorder prediction 199 218 - -
Car01g00755 344 CDD GT1 227 292 - -
Car01g00755 344 Coils Coil 160 180 - -
Car01g00755 344 ProSiteProfiles Myb-like domain profile. 221 286 IPR001005 -
Car01g00755 344 Gene3D - 229 291 - -
Car01g00755 344 MobiDBLite consensus disorder prediction 70 84 - -
Car01g00755 344 Pfam Myb/SANT-like DNA-binding domain 227 315 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00755 Car-Chr1 6441677 6443851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00755 109 324 Trihelix Transcription Factor Family AT5G47660 46.753 4.34e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car01g00755 Myb_DNA-bind_4 5.7e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00755 - - mtr:MTR_2g026725 457.218