Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00735 ATGCAAACATCTCCAAAAAAAACAAATTCAGCTGGTATTCATATATACCACCAGCACAAACCAGTGCAAGAAATTATTGATTCATACACTCATTACAAATTATCACAAAAACAAAGCTATTCATTCAATGATAGTAGCAGTCAAGGAACAAATAATGTTTCTTATGAAACATCCAAAAGGGATCAATTCTATACCTTGGAATCATCTCAAGGTTTCATAGATTTTGATTCACCTTCAAGTGCTAGTGTATCATCATCATCCAACAATAGGAGTAACCCTTTTTTGTCTCCACAAGTTTCTCACTCTCATTCCTCTAATTACACCAATGGATCACCAATAAGTGTTCACTCTACTGATAATGGTAACTATGAATTGAAGCACAAGCTTAAGGAATTGGAGATATCATTGTTAGGTCCTGAGTCAGATATTGTTGACAGTTCTCAATGCTGCTCAAAGGgtagtagtagtagtagtCACCAACAAGGTGAATATAATTGGTCTCAAATTGAAGAAATGATTCCAAAGTTAGACTTGAAAGATGTTTTAATTAAATGTGCACAAGCTGTTTCTGATGGTGATTTTCAAACAGCATTAGCCTTCATGAACAATGTGTTGGGAAAAATGGTATCAGTTTGTGGTTTACCAATTCAAAGGTTAGGTGCTTATATGTTGGAAGGTTTAAGAGCAAGGTTGGAATCATCAGGGAGTGTAATTTATAAAGCATTGAAATGTGAAGAACCAACAAGCAAAGAATTAATGAGTTATATGCATATTTTGTATCAAGTTTGTCCTTATTGGAAATTTGCTTACCTAACTTCCAATGTTGTCATTTGTGAAGCAATGCAAAATGAGTCAAGAATTCATATAATTGACTTCCAAATTGCACAGGGGACACAGTGGTTGTTACTTATGCAGGCTCTTGCGCGTAGACCGGGCGGATCTCCTTTTATTCGCGTGACAGGTATCGATGATTCTCAGTCGTCTCATGCTAGAGGTGGAGGACTTGATATTGTTGGAAAAAGATTATCAGATTATGCTAAGTCTTGTGGTGTTCCATTTGAGTTTCATAGTGTTGCAATGTATGGATGTGAGGTTGAACAAAAAGATTTGGTAGTTCAACATGGTGAAGCACTTGCTGTGAATTTTCCTTTTGCTTTACATCACATGCCTGATGAAAGTGTGAGCACTGAGAATCATAGAGACAGGCTTTTGAGATTGGTCAAAAGTTTGTCACCTAAGGTTGTGATTCTTGTGGAGCAAGAATCAAACACCAACACTTCTCCATTTTTCAATAGGTTTGTTGAGACAATGAGCTATTACACTGCTATGTTTGAGTCGATAGACGTGGCGCTTCCCAGAAACGATAAGAAGAGGATTAGCGCAGAACAACACTGCGTGGCGCGCGATATTGTTAACATGATTGCTTGTGAAGGGGGTGAGAGAGTTGAAAGACATGAATTGTTTGGAAAGTGGAGGGCAAGATTTTCAATGGCAGGTTTTGTACCATTACCTTTGAGTCCATCAGTGATTGATTCAGTTAGAAGTCTGTTGAATGAGTTTGATGAGAATTATAGGCTTGAACATATAGATGTTGTTATCTATTTAGCATGGAAGAGTAGAGCTATGTGTACCTCTTCTGCTTGGAGATGTTATTGA 1656 0.3696 MQTSPKKTNSAGIHIYHQHKPVQEIIDSYTHYKLSQKQSYSFNDSSSQGTNNVSYETSKRDQFYTLESSQGFIDFDSPSSASVSSSSNNRSNPFLSPQVSHSHSSNYTNGSPISVHSTDNGNYELKHKLKELEISLLGPESDIVDSSQCCSKGSSSSSHQQGEYNWSQIEEMIPKLDLKDVLIKCAQAVSDGDFQTALAFMNNVLGKMVSVCGLPIQRLGAYMLEGLRARLESSGSVIYKALKCEEPTSKELMSYMHILYQVCPYWKFAYLTSNVVICEAMQNESRIHIIDFQIAQGTQWLLLMQALARRPGGSPFIRVTGIDDSQSSHARGGGLDIVGKRLSDYAKSCGVPFEFHSVAMYGCEVEQKDLVVQHGEALAVNFPFALHHMPDESVSTENHRDRLLRLVKSLSPKVVILVEQESNTNTSPFFNRFVETMSYYTAMFESIDVALPRNDKKRISAEQHCVARDIVNMIACEGGERVERHELFGKWRARFSMAGFVPLPLSPSVIDSVRSLLNEFDENYRLEHIDVVIYLAWKSRAMCTSSAWRCY 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00735 551 Pfam GRAS domain family 178 549 IPR005202 -
Car01g00735 551 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Car01g00735 551 MobiDBLite consensus disorder prediction 77 119 - -
Car01g00735 551 PANTHER SCARECROW-LIKE PROTEIN 13 28 548 IPR030005 -
Car01g00735 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 548 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00735 Car-Chr1 6265735 6270613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00735 1 549 GRAS Transcription Factor Family AT4G17230 53.777 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car01g00735 GRAS 3.5e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00735 - - gmx:100819190 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00071 07 713315 716683 Car01g00735 01 6265735 6270613 PCT