Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00688 ATGATCACCACATATAAAATTTTCTTAATTTCCCTTCTCTTTGTAATTCCAAGCGAAGGAAAATGTTTATCTGGCTGCAACCTTGCACTAGCATCCTATTACATATACGAAGGAACAAATCTAACTTACATTAGCAAACTTTTTAATCAACAATACTCCGAAATTCTAAAATACAACCCAAGTGTAAATAGCCCCGATAGTATCCAAAGCCAAACAAGAATCAACGTGCCTTTCACGTGCGATTGTCTCAACGGTGTTTTCTTAGGACACACTTTTTCTTACATAGCAAATCACGGTGACACATACAACGCAATTGCAAAAGTTTATTATTCGAATCTTACTACTGAGGATTGGGTGACCAAAGTCAATAGTTGGATACCAACGAATTTACCCGACAGTGCTGAGATTAATGTTACGGTTAATTGTTCTTGTGGAGATAGACACGTGTCCAAGGATTATGGCTTGTTTTTAACGTATCCACTTCTTCCCGGTGATAACTTGAAAGGGATTGCGGCGGATTATAGTGTTCCGGTGGAGGTGCTGCGGAGGTATAACCCTGCTTCAGATTTTAGTGCTGGATATGGACTTGTTTTTGTGCCGGCTAAAGATGAAAATGGAAACTTTCCACCACTGCATTTGGGGTCATCAGGAATATCAAAAGGAGCCATTGTTGGCATAGTTTTTGGAGGAGCTGTTGGAATCTTAGTTTTGGCACTCATTCTATATATTGTGTTCTATAGAAGAAAGAAAGTGGCTGAAGTAACCCTTCTACCAGTCCCAGGAGCATTTGAAGATCAATCTAGTCAACTCCAACATGGTTGTGGAAGTAGCATAGATAAGGCATCAGATTCTACAACAGTTGCTTCTCCAAGGTTGACAGGTATTACAGTGGACAAGTCAGTAGAGTTCTCATATGAAGAGTTAGCCAAAGCTACTGATGGATTTAGCATGGCTAATATAATTGGTCGAGGTGGCTTTGGATCTGTATACTATGCTGAGCTTCGAAATGAGAAAGCTGCAATAAAAAAGATGGATATGCAAGCATCAAAAGAGTTCTTAGCTGAACTAAAGGTTCTGACACACGTTCATCACTTGAACTTGGTGCGGCTAATAGGATATTGTGTTGAAGGATCCTTATTTTTGGTTTATGAGTACATTGAAAATGGCAACTTAAGTCAACATTTGCGTGGCTCAGGGAAGGATCCATTATCATGGCCAGCTAGAGTTCAAATTGCCTTAGACTCAGCAAGAGGACTTGAATACATTCACGAGCATACAGTTCCTGTCTACATTCATAGAGATGTTAAATCAGCAAACATTTTGATAGATAAAAACTTTCGTGGAAAGGTTGCAGATTTTGGTCTTACAAAATTGACTGAATATGGTAGTTCGTCGTTACAAACGCGCCTTGTGGGAACATTTGGCTATATGCCCCCTGAATATGCACAGTATGGTGAAGTTTCTCCAAAAATAGATGTATATGCTTTTGGAGTTGTTCTGTTTGAGCTTATATCTGGCAAGGATGCTATTGTCAAGACAAAGGAGCCTGAGAATGAATCAAAAGGACTAGTTGCACTGTTTGAAGAAGTTTTTGGTCTTTCAGAACCAAAAGAAGATCTTGGTAAACTTGTTGACCCTAGGCTTGGTGAAAATTACCCTCTTGACTCAGTATTTAAGATGTCACAGCTTGCCAAAGCTTGTACACATGAAAATCCTCAACTTAGGCCAAGCATGAGATCAATAGTAGTTGCCTTAATGACACTTTCATCTGCAGCTGAGGATTGGGATGTTGGCTCCTTCTATGAAAACCAAGCATTAGTGCATCTAATGTCAGGAAGATAA 1842 0.3947 MITTYKIFLISLLFVIPSEGKCLSGCNLALASYYIYEGTNLTYISKLFNQQYSEILKYNPSVNSPDSIQSQTRINVPFTCDCLNGVFLGHTFSYIANHGDTYNAIAKVYYSNLTTEDWVTKVNSWIPTNLPDSAEINVTVNCSCGDRHVSKDYGLFLTYPLLPGDNLKGIAADYSVPVEVLRRYNPASDFSAGYGLVFVPAKDENGNFPPLHLGSSGISKGAIVGIVFGGAVGILVLALILYIVFYRRKKVAEVTLLPVPGAFEDQSSQLQHGCGSSIDKASDSTTVASPRLTGITVDKSVEFSYEELAKATDGFSMANIIGRGGFGSVYYAELRNEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGKDPLSWPARVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLFELISGKDAIVKTKEPENESKGLVALFEEVFGLSEPKEDLGKLVDPRLGENYPLDSVFKMSQLAKACTHENPQLRPSMRSIVVALMTLSSAAEDWDVGSFYENQALVHLMSGR 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00688 613 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Car01g00688 613 Gene3D Phosphorylase Kinase; domain 1 296 385 - -
Car01g00688 613 CDD STKc_IRAK 321 582 - -
Car01g00688 613 Pfam Protein tyrosine and serine/threonine kinase 317 584 IPR001245 GO:0004672|GO:0006468
Car01g00688 613 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 613 IPR044812 GO:0019199|GO:0045087
Car01g00688 613 SUPERFAMILY Protein kinase-like (PK-like) 293 585 IPR011009 -
Car01g00688 613 Gene3D Transferase(Phosphotransferase) domain 1 386 597 - -
Car01g00688 613 SMART serkin_6 315 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00688 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Car01g00688 613 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 7 613 - -
Car01g00688 613 ProSiteProfiles LysM domain profile. 31 76 IPR018392 -
Car01g00688 613 ProSiteProfiles Protein kinase domain profile. 315 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00688 Car-Chr1 5718186 5726152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00688 7 613 Receptor kinase-like Gene Family AT3G21630 56.169 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car01g00688 PK_Tyr_Ser-Thr 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00688 - K13429 gmx:100802308 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00688 01 5718186 5726152 Car01g00688 01 5718186 5726152 ECH