Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00669 ATGTCTTCATCATCTTCTTCTCTTATTAGCGGTGTTGTTGATAATAATCCTTCTTCACACTTGACTCAGCTACGAACTCCTTCTCATTTGATTCAACAGATGAGTCTAAAACCACCTATGGTCAGACCTTATGTTCGATCCAAAATGCCTCGCCTTCGATGGACACCAGATCTTCACCGTTGCTTCGTCCATGCAGTTCATAGGCTTGGAGGAGAAGACAGGGCCACACCAAAGTTAGTTTTACAACTAATGAATGTAAAGGGACTTACTATATCTCATGTTAAAAGCCACCTTCAGATGTACAGGAGCATGAAACACGAGCAGATGAATGAAGCAGCAAGGAAGAATAATATGGCACTATTAGGTTCCACAGAATCCTCCTCAGCTGTTGTTCCGAGCTGCGGTACGGAAGATCTTGCTCGAACCCAAACTCAACGGAATGGTTATGAGCCAGAGTCTAGTTACAATAATGAATCGATTATAATTGGTGACGGCCATAACCAGAAGATGCACACTTACATCATCTTCAAGGGTATTCTCAGAACCGACACTGTTCAAGCAAACATAAGAGAGCATCAAAGAGGCAGTTTACATGAATTGTTGACTCGGAGTGAGGCACGTGAAGACACAAATGATGTCTCTCTTGAGCTCACGCTCACCTGA 663 0.4314 MSSSSSSLISGVVDNNPSSHLTQLRTPSHLIQQMSLKPPMVRPYVRSKMPRLRWTPDLHRCFVHAVHRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRSMKHEQMNEAARKNNMALLGSTESSSAVVPSCGTEDLARTQTQRNGYEPESSYNNESIIIGDGHNQKMHTYIIFKGILRTDTVQANIREHQRGSLHELLTRSEAREDTNDVSLELTLT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00669 220 Gene3D - 49 107 - -
Car01g00669 220 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Car01g00669 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Car01g00669 220 MobiDBLite consensus disorder prediction 1 21 - -
Car01g00669 220 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Car01g00669 220 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 32 134 - -
Car01g00669 220 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 50 104 IPR006447 GO:0003677
Car01g00669 220 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 32 134 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00669 Car-Chr1 5608766 5612223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00669 41 183 G2-like Transcription Factor Family AT2G42660 44.966 4.55e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car01g00669 Myb_DNA-binding 3.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00669 - - cam:101502381 431.409