Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00657 ATGGAAATAATTTTGAATATCTTGTTGGTCTTCTTGGTGACACCCTTTTTCCTCCTAAACATGATTAGTTGTGAGGATGACGAGGTGAAAAAGACACTGATACAGTTCATGACACAACTCTCAGGCCAGCAGAATAACAATTCCACTTTGGTTTGGAAACTAGAATCCGATCCCTGCAAGGACCGCTGGTATGGTGTATACTGTGATGCTCAAATGTCTATAAAGAGGTTGAATCTTTACAGGCTCAATTTGTCAGGGACTCTTGATGTGGCCTTGCTATGCAACTTGCAGCCTCTAGCTGCATCTCTCACCTTTCTTAGTCTTGATGACAACAACATCAGCGGTCGAATAACGTCCGAGATTGGAAACTGCAAACAACTCACCCGCCTCCACGTAAGAGGAAACCAACTTACTGGAAACCTTCCTACTTCACTTGCCATGTTGAACAACTTGAAAAGACTAGACATTTCAGACAACAGGTTTTCGGGACTGTTGCCGAACGTGGCAAGAATCTCCGGCCTCAACATGTTCTTAGCACAAAACAACGACCTCAGTGGAACTATACCTGCATTTGATTTCTCCAATTTCGACCATTTCAACGTTTCCTTCAACAATTTCAGTGGCCAAATTCCAGATGTGAATGGTCATTTCGTTGCCGACAGCTTCCTCGGTAATCAAGGACTATGTGGATATCCACTACAAAAAAATTGTTCTGAGAAGCCTCTGAGTAGTACTGTTAGTCAAACATCAGAAGAAAAATCAAAGGGTCCTTCTAAAGAACAGATTCTTATGTATTCAGGCTATGCTGCATTAGGAGTTATCGTAATCCTTTTTGTAATCTTGAAGCTGTGTACAATAAAAAAGACAGGAAAGAAAGTTGAAGCAGCACTGAATGGTGATATTGAAAAATCCAGCTATGTTTCAAGTGAATCCAAAGCAGAAGAGTTAAACAAATCTGGATTTTCAGTTGCATCTGAAAGTGGAACGGTCTCACAACAATCACTTATAGTTCTTTCAAAGCCAGTGGTGAATGAATTGAAATTGGAAGAGTTGTTGAGAGCACCTGCAGAATTGATTGGAAGAGGAAATAATGGAAGTCTTTATAAGGTGATGCTAACCAATGGTATAATAGTTGTTGTAAAAAGGATTAAAGGTTGGAGTATTTCTAGTGTTGATTTCAAGCAAAGAATGCAACTTTTGAATCAAGCAAAGCACCCTCATGTTCTTTCACCTCTTGCTTTCTATTGTTCTAAACAAGAGAAGCTTTTGGTCTATGAATATCAGAAGAATGGAAGTTTATTCAAGCTTCTACATGGTACTTCAAAAACCTTTGATTGGACCAGCAGACTTGGAATTGCATCTACAATAGCTGAAGCATTAGCTTTCATGCACCAAGAGCTAGGCCAACATGGTATCATTCACGGCAACATAAAATCATCAAACATTTTGCTAAACAATAATATGGAACCATTTATAAGTGAGTATGGTGCTCTTGGTAAAAATGATCAACAACAAAGTTCAACTCCTATTGATACATTCAAAGGAGATGTTTATGGCTTTGGTGTTATTCTTCTTGAACTTCTTACTGGAAAATTGGTGAAGAATAATGGAATTGACTTGACTGATTGGGTTCAATCAGTTGTAAGGGAAGAATGGACAGGGGAAGTATTTGATAGATCATTACTTTCAGAGTATGCAAGTGAAGAGAGGATGGTTAATATGCTTCAAGTGGCTATAAGATGTGTTAATGATTCCTTAGAGGCTAGGCCAAGTATGAACCAAGTGGCTCTTATGATTAATACTATTAAAGATGAAGAGGAAAAATCATTGATTTACCAAGTTTGA 1845 0.3843 MEIILNILLVFLVTPFFLLNMISCEDDEVKKTLIQFMTQLSGQQNNNSTLVWKLESDPCKDRWYGVYCDAQMSIKRLNLYRLNLSGTLDVALLCNLQPLAASLTFLSLDDNNISGRITSEIGNCKQLTRLHVRGNQLTGNLPTSLAMLNNLKRLDISDNRFSGLLPNVARISGLNMFLAQNNDLSGTIPAFDFSNFDHFNVSFNNFSGQIPDVNGHFVADSFLGNQGLCGYPLQKNCSEKPLSSTVSQTSEEKSKGPSKEQILMYSGYAALGVIVILFVILKLCTIKKTGKKVEAALNGDIEKSSYVSSESKAEELNKSGFSVASESGTVSQQSLIVLSKPVVNELKLEELLRAPAELIGRGNNGSLYKVMLTNGIIVVVKRIKGWSISSVDFKQRMQLLNQAKHPHVLSPLAFYCSKQEKLLVYEYQKNGSLFKLLHGTSKTFDWTSRLGIASTIAEALAFMHQELGQHGIIHGNIKSSNILLNNNMEPFISEYGALGKNDQQQSSTPIDTFKGDVYGFGVILLELLTGKLVKNNGIDLTDWVQSVVREEWTGEVFDRSLLSEYASEERMVNMLQVAIRCVNDSLEARPSMNQVALMINTIKDEEEKSLIYQV 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00657 614 Gene3D Transferase(Phosphotransferase) domain 1 429 613 - -
Car01g00657 614 SUPERFAMILY Protein kinase-like (PK-like) 357 598 IPR011009 -
Car01g00657 614 ProSiteProfiles Protein kinase domain profile. 353 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00657 614 Gene3D Phosphorylase Kinase; domain 1 319 427 - -
Car01g00657 614 Gene3D Ribonuclease Inhibitor 98 243 IPR032675 -
Car01g00657 614 Gene3D Ribonuclease Inhibitor 21 97 IPR032675 -
Car01g00657 614 PANTHER OS05G0588300 PROTEIN 8 612 - -
Car01g00657 614 Pfam Protein kinase domain 357 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00657 614 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Car01g00657 614 PANTHER OS10G0387400 PROTEIN 8 612 - -
Car01g00657 614 SUPERFAMILY L domain-like 49 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00657 Car-Chr1 5479937 5482572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00657 1 603 Receptor kinase-like Gene Family AT3G08680 34.215 1.22e-88 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car01g00657 Pkinase 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00657 - - gmx:100813796 854.358