Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00644 ATGGGGGCCACAGGAACTGGAAAGACAAAATTAGCCATAGATTTGGCTAAACATTTTCAACCAGCTGAAATAGTGAATTCAGATAAAATGCAAGTTTATAAAGGTCTTGACATTACAACAAATAAGGTAACAAAAGAAGAATGTGACGGGGTCCCACACCATCTCTTAGGTGTAATTGATCCTACTTCAAATTTCACTGCAAACGATTTTTGTCATCATGCTTGTTTAGCAATTGATTCAATTGTGGAAAAAGATGGTTTACCAATTATTGCTGGTGGTTCAAATTCATACTTAGACACCTTGGTGAACCATTGTAGTGAATTTAGATTAAGGTATGAGTGTTGTTTTCTTTGGGTTGACGTGTCACTACCCGTGCTTCATTCCTCACTTCAATCACGTGTTGATCGAATGATTGAAGCTGGTCAAGTTGATGAAGTTCGTGAATTCTTTAATCCTTGTGGTGATTATACAAAAGGAATTCGAAGGGCTATTGGAGTACCTGAATTTCACGATTTTCTAGTAGCTGAAGCAAATTCAGCTGATGAGAGAACAAAAAAGAGACTTTTGGAAAGTGCCATTGCAAGAGTGAAGATTAATAATTGCACGCTTGCGAATAGACAAGTTCAAAAGATTCGTCGATTAAATGGAATGTGGAAAAGGAACATGCATCGTCTTGATGCAACTGAACCGTTGATTAAAGGTGGATCACGTGGTTGTGAGGAAGTGTGGGAAAATCATGTACTTACAAAAAGTCTTATGATTCTTCACAATTTTCTATACGGTGAAATAAGTGTTCGGTCCAGAATTATATCATCAAAAGATGTAATCACTGCCTTTTCTGAACTGCCATCTTCAATGGCATTGTCCGCTATTGCAGCGGCAGCCCATTAG 891 0.3793 MGATGTGKTKLAIDLAKHFQPAEIVNSDKMQVYKGLDITTNKVTKEECDGVPHHLLGVIDPTSNFTANDFCHHACLAIDSIVEKDGLPIIAGGSNSYLDTLVNHCSEFRLRYECCFLWVDVSLPVLHSSLQSRVDRMIEAGQVDEVREFFNPCGDYTKGIRRAIGVPEFHDFLVAEANSADERTKKRLLESAIARVKINNCTLANRQVQKIRRLNGMWKRNMHRLDATEPLIKGGSRGCEEVWENHVLTKSLMILHNFLYGEISVRSRIISSKDVITAFSELPSSMALSAIAAAAH 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00644 296 Pfam IPP transferase 111 213 - -
Car01g00644 296 Pfam IPP transferase 31 105 - -
Car01g00644 296 Gene3D - 1 259 IPR027417 -
Car01g00644 296 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 1 262 - -
Car01g00644 296 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 262 IPR039657 -
Car01g00644 296 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 123 222 - -
Car01g00644 296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 109 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00644 Car-Chr1 5344302 5345192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00644 111 262 C2H2 Transcription Factor Family AT2G27760 32.584 6.94e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00644 K10760 - gmx:100812928 432.95