Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00620 ATGATGTCTCTATTAATTCTCACACCTTTTGCCATTGCTGTGGAAGGTCCCAAAGTTTGGGCTGTAGGCTGGCAAACTGCAGTGTCTCAAATTGGTCCCAATTTTGTATGGTGGGTGGTTGCTCAGAGTGTGTTCTATCATTTGTATAATCAAGTATCATACATGTCTCTTGATCAGATTTCACCCTTAACATTTAGTATAGGAAACACAATGAAGAGAATTTCTGTAATAGTCTCTTCAATCCTTATTTTTCACACTCCACTTCAACCTATCAATGCTCTTGGAGCCGCCATTGCAATTCTTGGCACCTTCATCTATTCACAGGCTAAACAGTGA 336 0.3988 MMSLLILTPFAIAVEGPKVWAVGWQTAVSQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPLQPINALGAAIAILGTFIYSQAKQ 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00620 111 PANTHER SOLUTE CARRIER FAMILY 35 1 110 - -
Car01g00620 111 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 1 110 - -
Car01g00620 111 Pfam Triose-phosphate Transporter family 1 107 IPR004853 -
Car01g00620 111 SUPERFAMILY Multidrug resistance efflux transporter EmrE 10 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00620 Car-Chr1 5129494 5130076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00620 1 111 Antiporters AT1G61800 85.586 2.54e-60 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00620 K15283 - gmx:100804205 204.912