Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00614 ATGAGTTGTTTTCCATGCTGCAAATCCGAAGTTGAATCACCTTCTTATAGACCATGTTCTAGGAAAATTTCAAAAGGAAGAAGAACATTCAAATCATTAGCAGCTGCTATGTCACTCAAATCAGGTAGCAGCAGGCATAGACAAATATCAGAAGAGATACTAAAATATGGAACTGCAAAAAATGATGTTAAAATATTCACATATGAAGAAATAGCTGATGCAACAAATAATTTCAGTTCTGATTGTCTTGTTGGAGAAGGTGGATTTGGGAATGTTTATAAAGGACAGATAAAAAGCATTGATCAAACTGTAGCTGTGAAGAAACTGAACAGAAATGGAAATCAAGGAACAAGAGAATTTTTTGCTGAGGTTTTAATGTTAAGCATGGTTAATCATCCAAATCTTGTGAAGCTTGTTGGTTATTGTGCTGAAGAGGATCAAAGGATTTTGGTTTATGAGTACATGGCCAATGGAAGTTTGGAAAATCACCTTCTAGATATAGGTAATGATAAGGAACCATTGGATTGGGAAACAAGAATGAAAATAGCTGATGGAGCAGCTAGAGGACTTGAATATCTGCATAATTCTGCAGATCCACCGGTGATTTTTCGCGATTTTAAATCGTCTAATATACTATTAGATGAAGATTTCAATCCAAAGCTTTCTGATTTTGGTCTTGCTAAGATTGCTCCAAGAGAGGGTGAGAACTTGGTCTCAACAAGGGTGATGGGGACTTATGGATATTGTGCACCTGAGTATGCTGCTACTGGTCAGCTATCCTCAAAGTCAGATATTTATAGTTTTGGGGTTGTTTTTTTGGAAATAATCTCTGGTAGGAGAGTTATTGACCCTACAAGAACTCGTGAACAACAAAATTTGATTGTTTGGGCACAACCTTTGTTTAAGGACAGAAACAAGTTCACTCTAATGGCAGATCCTTTGCTTAAAGATAAGTTCCCTGTGAAGGGACTATTTCAAGCCCTTGCAGTGGCAGCAATGTGTCTACAAGAGGAAGCCGAAACGCGACCTTCCATGGAAGATGTTGTAACAGCTATTGCACATTTAGCAGTACACAAAACTGAAGAAAAAGACATAGCTGGTGAATCTCTATTAACTGCTGGTCATGTTGAATCTTTTAGAGCTACAAATTCAATGGGATCTGAAAGGGCATAG 1173 0.3751 MSCFPCCKSEVESPSYRPCSRKISKGRRTFKSLAAAMSLKSGSSRHRQISEEILKYGTAKNDVKIFTYEEIADATNNFSSDCLVGEGGFGNVYKGQIKSIDQTVAVKKLNRNGNQGTREFFAEVLMLSMVNHPNLVKLVGYCAEEDQRILVYEYMANGSLENHLLDIGNDKEPLDWETRMKIADGAARGLEYLHNSADPPVIFRDFKSSNILLDEDFNPKLSDFGLAKIAPREGENLVSTRVMGTYGYCAPEYAATGQLSSKSDIYSFGVVFLEIISGRRVIDPTRTREQQNLIVWAQPLFKDRNKFTLMADPLLKDKFPVKGLFQALAVAAMCLQEEAETRPSMEDVVTAIAHLAVHKTEEKDIAGESLLTAGHVESFRATNSMGSERA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00614 390 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
Car01g00614 390 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Car01g00614 390 ProSiteProfiles Protein kinase domain profile. 78 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00614 390 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 388 - -
Car01g00614 390 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
Car01g00614 390 SUPERFAMILY Protein kinase-like (PK-like) 63 357 IPR011009 -
Car01g00614 390 Pfam Protein kinase domain 83 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00614 390 CDD STKc_IRAK 84 349 - -
Car01g00614 390 PANTHER OS07G0668900 PROTEIN 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00614 Car-Chr1 5094696 5097455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00614 64 357 Glycoside Hydrolase AT3G07070 62.585 1.72e-139 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car01g00614 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00614 - - gmx:100305361 625.165