Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00588 ATGATTGTAAAGGAACATCCTGTTGGGACTGAACTGGCAATGAGTAATGTTATTGGGGAGGAGGAAATAGATTTTTCTTGTGATCCATACATAGGGTTAGAATTTTTGtctgcagatgatgcacttaagttttatatatcatatgctaatcgtatgggatttaaagtacggattggtcaactttatcggtcgagaactgatgggtctgtttcttctcgaagatttgtgtgttcgaaggagggacatcagctcaaCTCGAGAACTGGTTGTCCAGCATTCATAAGGGTACAAATAAATGATTCTGGAAGGTGGGTTGTTGATCATTTTCACAAGGACCATAACCATAATCTTGTTGAAACAGAAAGTGAAAATTCGATTCCAAAATTGCAGCCAAAGGCCGCTGCAGCTGTTGATTATTCTACTGAAGTCACTCGCAGGCCAAGGAAAAAATTGCTTGAAGTAGCCAATGATGAACCTATTTGTTCCTTTGGCGTTATTAATTTCAAGCGCTTGAGAAAGGAAGAGCTTGAAGGACAGCCTAGGATTGAACCATATGTTGGTCAAGAGTTCAGTTCCCCTAATGAGGCCTACCAATTTTATCATGCTCATGCAGCGCATTTGGGTTTTGGAATTCGAATTGGTCAATTGTTTCGTTCTAAAAATGACGGGTTGATTACATCCCGACGCTTTGTGTGTTCAAAAGAAGGGTTCCAGCACCCTTCAAGAGTTGGTTGTAAGGCTTACTTAAGGATCAAGAGCCAACCATCAGGAAAGTGGGTAGTCGACCGTCTTGAAAAAGATCATAATCATGATCTAGGCCCTGAAAAGGAACGCGAGACAAAAAGGCTTCCTGCTTCTAATATTCTGACTGAGGATGTAAATACTGAATTGGTGAATGGCGACATATTTAGGATAGATAACTACCCTGTCCTAAAAGGAGGTAGACAAAATCACATTAGAAGTGATTGGTACaacatgcttacagagtattttcaatcaagacaagcagaagatacaggattctttcatgccatggaagttgataatggtaattgcatgagcatattttgggctgatggcagatctagatacgcatgtagtcagtttggcgatgtccttgttgtagacacatcatatagaaagagcgtctatatggtaccatttgctacttttgttggagttaaccaccacaagcaacctgtgcttcttggatgtgctctaattgctgatgaatctgaagagtctttcacttggttgtttcagacatggcttagagcaatgtctggccggcagcctctgtcagtaatagctgatcaagacgtttcaattcagagggcaatagcaaaagtctttccagtaacccatcaccgcttttcgttgtggcaaattaaggcaaaggaacaagagtatgcaggtttgctgggtaatggattcacaaaagattatgaaaagtgtgtttacctgaaccagacggttgatgaatttgacactgcatggaatgctctactcgtcaaatatggattgaaggacaatgattggctaaaagaaatgtatgagaagcgtgcatcctgggttccattctatttaaagggcacattttctgctggaattcccatgaaagaaagcatggaatcattctttggtgcacttttaaatggccaaacacctctcacagagttcattccacggtatgaaagaggtcttgagcgacgtcgtgaagaagaaagaaaagaggattttaatacttctaattttcaaccatttttgcaaactaaagaaccagtagaagaacaatgtagaaggctttacactcttgcaatattcaaagtatttcaaaaagagcttttgcagtgctatagttaccttgggtttaaaatctacgaagaaggtcccctcagcagatatttggtgcgtaagtgtggaaatgagatggagaagcatgttgttacattcaatgcatccaatcttgacattagttgtagctgtcagatgtttgaatatgaaggtgttctttgtagacatgtgttgagggttttccaaatattggaattaagtgaagttccttcgcgctacatcttacatcgatggacaagaaatgccgaagatggtgttttCCCTGACATAGAATCATGGAGTAGCTCTCAGGAGCTAAAAAGTTTGATGCTATGGAGTCTAAGAGAAACAGCGTCTAAATACATAGATGCTGGTGCATCATCCATTGAAAAGTATAAACTTGCCTATGAGATTTTGCGTGAGGGTGGGAGAAAGCTGTGTTGGAACAGGTGA 2286 0.1789 MIVKEHPVGTELAMSNVIGEEEIDFSCDPYIGLEFLSADDALKFYISYANRMGFKVRIGQLYRSRTDGSVSSRRFVCSKEGHQLNSRTGCPAFIRVQINDSGRWVVDHFHKDHNHNLVETESENSIPKLQPKAAAAVDYSTEVTRRPRKKLLEVANDEPICSFGVINFKRLRKEELEGQPRIEPYVGQEFSSPNEAYQFYHAHAAHLGFGIRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCKAYLRIKSQPSGKWVVDRLEKDHNHDLGPEKERETKRLPASNILTEDVNTELVNGDIFRIDNYPVLKGGRQNHIRSDWYNMLTEYFQSRQAEDTGFFHAMEVDNGNCMSIFWADGRSRYACSQFGDVLVVDTSYRKSVYMVPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWLRAMSGRQPLSVIADQDVSIQRAIAKVFPVTHHRFSLWQIKAKEQEYAGLLGNGFTKDYEKCVYLNQTVDEFDTAWNALLVKYGLKDNDWLKEMYEKRASWVPFYLKGTFSAGIPMKESMESFFGALLNGQTPLTEFIPRYERGLERRREEERKEDFNTSNFQPFLQTKEPVEEQCRRLYTLAIFKVFQKELLQCYSYLGFKIYEEGPLSRYLVRKCGNEMEKHVVTFNASNLDISCSCQMFEYEGVLCRHVLRVFQILELSEVPSRYILHRWTRNAEDGVFPDIESWSSSQELKSLMLWSLRETASKYIDAGASSIEKYKLAYEILREGGRKLCWNR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00588 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 26 120 - -
Car01g00588 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 147 757 - -
Car01g00588 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 147 757 IPR031052 GO:0006355
Car01g00588 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 120 IPR031052 GO:0006355
Car01g00588 761 Pfam SWIM zinc finger 654 680 IPR007527 GO:0008270
Car01g00588 761 SMART 26again6 658 685 IPR006564 GO:0008270
Car01g00588 761 Pfam MULE transposase domain 372 465 IPR018289 -
Car01g00588 761 Pfam FAR1 DNA-binding domain 198 272 IPR004330 -
Car01g00588 761 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Car01g00588 761 ProSiteProfiles Zinc finger SWIM-type profile. 647 683 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00588 Car-Chr1 4875121 4878308 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car01g00588 MULE 1.5e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00588 - - gmx:100816656 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00588 01 4875121 4878308 Car01g00588 01 4875121 4878308 ECH