Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00582 ATGGGTTGTGTTCATGGAAAGTGTTGTAGCCGTTACCCTCCACCATCAATAGGTGGTTCTAGGGATTATAGAGAAAATGGCCCTTATTCTGCACAGAGGAAGCACATACTCACTCAGAGATCACTGCACATTGTTGTTGTTCCTTCACACAACTTCACTTTGGAATATTCTGTTCTAACTCAGAGAGGTTACTACCCTGATTCACCTGATAAAGAAAACCAAGACTGTTACTGTGTTAAAACACAATTGCAAGGTAATTCAAGTGTTCATTTCTTTGGTGTTTTTGATGGACATGGTGACTTTGGTGGAATGTGTTCCAATTTTGTTAAGAATAAGTTGGTTGAAAAATTGTCAAATGATCCTGCATTGTTAGAGGACCCTGTTAAGGCTTATAATTCAGCATTTTTAGCTACAAATGATGACTTGCATAAGAATGAAATTGATGATTCTATGAGCGGAACTACTGCGATTACCGTGCTTGTGATAGGGGATACACTTTATGTTGCTAATGTTGGCGATTCAAGGGCCGTGGTAGCTGTTAAGGATGGTAATAGAATTGTTGCTGAGGATTTGTCCTCTGATCAGACACCATTTAGGAGAGATGAATATGAGAGAGTTAAGCTTTGTGGTGCTAGGGTGTTGAGTGTTGATCAGGTTGAAGGGCATAAGGATCCGGATATTCAGAGTTGGGGTGATGAAGAGAGTCAGGGCGATGATCCTCCTCGGTTATGGGTTCAGAATGGAATGGTTCCTGGTGCTGCTTTTACAAGGAGTGTAGGGGATAGTTTGGGAGAGAGTATTGGTGTTATTGCTGTTCCGGAGGTGTTAACTGTGCAGCTTACCCCGAATCATCTTTTCTTTGTTGTTGCAAGTGATGGTGTGTTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCAGCAAGTTATTCAGATCCCCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTATAAATTATGGTTGGAACATGAGGGTCGAACCGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCTAATTCAGGTACATCCAACTATGGATCAGGAGAGATCAATGTCAGTACTGTAACGAGGGTCAAAAAGGGAAGGGGAACTTCTGGTATATCAGCTACCACTGGTTTAGATGTTCATCATGCCGTGAGGAGTGGTTTCTCCGATCCGCTGTCCAGTCAGCATGTGGTTTCATCGAGAAGCCAAGCCATAGTAGTTCCCTCTCCCACATGTCAAAGACCAGTTGAATTGGTATAG 1278 0.4241 MGCVHGKCCSRYPPPSIGGSRDYRENGPYSAQRKHILTQRSLHIVVVPSHNFTLEYSVLTQRGYYPDSPDKENQDCYCVKTQLQGNSSVHFFGVFDGHGDFGGMCSNFVKNKLVEKLSNDPALLEDPVKAYNSAFLATNDDLHKNEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVVAVKDGNRIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGHKDPDIQSWGDEESQGDDPPRLWVQNGMVPGAAFTRSVGDSLGESIGVIAVPEVLTVQLTPNHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSGTSNYGSGEINVSTVTRVKKGRGTSGISATTGLDVHHAVRSGFSDPLSSQHVVSSRSQAIVVPSPTCQRPVELV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00582 425 Pfam Protein phosphatase 2C 82 320 IPR001932 -
Car01g00582 425 Gene3D - 39 347 IPR036457 -
Car01g00582 425 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 33 421 - -
Car01g00582 425 MobiDBLite consensus disorder prediction 222 241 - -
Car01g00582 425 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 33 421 - -
Car01g00582 425 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Car01g00582 425 SUPERFAMILY PP2C-like 40 347 IPR036457 -
Car01g00582 425 CDD PP2Cc 71 345 IPR001932 -
Car01g00582 425 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Car01g00582 425 SMART PP2C_4 51 343 IPR001932 -
Car01g00582 425 MobiDBLite consensus disorder prediction 222 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00582 Car-Chr1 4825651 4829223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00582 1 350 PP2C-type Phosphatase Gene Family AT3G06270 72.159 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00582 - - mtr:MTR_2g020970 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00582 01 4825651 4829223 Car01g00582 01 4825651 4829223 ECH