Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00577 ATGGCATCACTGGTTGCCAGTGGTAACAGTCAAATGTCTTCTTCAGTTTCTGTTCAAGAAAAAGGAAGTAGGAATAAGAGAAAATTCAGGGCTGATCCACCTTTAGGGGAGCCAAACAAGATTACACCTTCACCTCAACATGAGAGTCTAAGCTATGAATTCTCGGCTGAAAAAATCGATATGACCCCAAGTTTTGGACAAGTCACAGCTTCTGACTTGTGCAGTGTTAGCCAAGATTGTTCTGATGGCTTGAAGCTTGACCTTGGATTATCTAGCCCTGCAGTTTCATCCGAAGTTAGGCCGAGCCAACCTAAGGTGGAACTAGAGACGTTTGAATCTCACGACGCTGATTGGAGTGATCTCACTGAAGTTCAGTTGGAAGAACTTGTCCTGAGCAATTTGCACACCATTTTCAAGAGTGCAATAAAGAAAATCGTTGCTTGTGGCTACACTGAAGATGTTGCTACGAAGGCTATGTTAAGGCCTGGCATCTGTTATGGATGCAAAGACACTGTGTCAAATATAGTTGACAACACTTTGGCATTTCTAAGAAATGGCCAAGAGCTTGATCCTTCGCGAGATCACTATTTTGATGATTTATCGCAGCTTGAGAAGTATATCTTGGCCGAATTGGTTTGTGTTCTTCGAGAGGTTAGACCATTTTTCAGTATTGGGGATGCAATGTGGTGTCTGTTGATTTGTGACATGAATGTGTCACATGCTTGTGCAATGGATGGGGACCCTTTAAGTAGTTTATGCAATGATGGCATCGGCGATGGCTGTTCTTCTGTCCAGACTGAATCCCAATCAAAATTGGAAACAAAAGGTCCTGAATTGAGTCTTCCAAGTCCTTGTAATTCAATTCCCTCGGGTTCTCAATCTGAGAAATCCCTTGTGGCGGAAAATTCTCAAATTCTTGGCGGACTCTCGGAGAAACAAGGAGGTGCTAATTTGGGAAGTCATTCTGTTGACAAGTCATCTGGTGCTTCTGGAGCATCTCAATCTCCCCTGCTACAAGAAAAGAGCGCAAGTGTTAGAAAGGTTCATTCCAGCAGCACTAAGAGGGACTACATTTTTCGTCAGAAGTCGATCCATGTGGAAAAAAGTTACCGGACATACGGGTCTAAAGGGTCTTCAAGAGGAGGAAAGCTGAGTGGCTTGAGTGGTTTAATCTTGGATAAAAAACTCAAATCTGTATCAGAATCTACTACCATAAACTTAAAGAGTGCATCCTTAAACATAAGCAAGGCAATGGGAATCGATGTCACTCAAGACAATCTCAACGCTGATTTCTCATCTAATGATGGACCATCTACCCTTACTTCAAAAAGTCTGGATTCTAGCAGTACTATTTCTCCGTTAGCCGTTCCTTCATCTTCAGAACCCGAAGCAAATGCTATACCCGCAGTCGGTAGCCCGGATGCATTATCAGCTACAGATACCGACCTTTCTCTTTCATTGTCTTCAAAAAGCAATTCAACTACAACACCTATCTGCTGCAGTAACAAGGTACCTAGTAGCAGTTGTGTGGGGGTACCAATTGTCAAGTCCGTGGGACCATGGATGCCGCAAGATAAAAAGGATGAGCTGATTTTGAAGATGGTTCCGAGGGTTCGGGAGCTGCAAAATCAGCTTCAAGAATGGACAGAATGGGCAAATCAAAAGGTGATGCAGGCTGCTCGTCGGTTGAGTAAGGACAAGGCTGAGCTTAAGACACTAAGGCAAGAGAAAGAAGAAGTTGACCGACTTAAAAAGGAGAAACAATGTCTTGAAGAAAACACAATGAAAAAGCTTTCTGAGATGGAAAACGCCTTGGGTAAAGCAGGCGGTCAGGTGGAACGAGCTAACACTGCCGTACGGAAGCTTGAAATGGAGAATGCTGCATTGAGGAAAGAGATGGAGGCTGCCAAGTTACGGGCGGCAGAGTCAGCAACAGGCTTTCAAGAGGTCTCTAGGAGGGAAAAAAAGACACAAATGAAGTTTCAATCATGGGAGAAGCAGAAAACCTTGTTACAGGAAGAGCTAATGACTGAGAAAAACAAATTGGCACAGATACAGAAGGAAAATAAGCAAGCCGAAATGCAACTGGAGAAACTTGAGGCTAGATGGAAGCAGGCAGCAAAGACAAAAGATGAACTTCTAATGCAGGCCGGTTCTATAAGAAAAGAAAGAGAACAAATCGAGGAGTCAGCGAAATCCAAGGAGGCAATGATCAAATTGGAAGCCGAGGAGGAGCTGCGAAGATACAGAGACGACATCCAGAAACTCGAAAAAGAAATTGCACAAATAAGACAGAAGTCCGACTCTTCAAAAATCGCTGCGCTAAAAAGAGGAATCGATGGAAGCTTTGCCAGCAGCTGTGCGGACAAGAAAAATGGTTCGTCTTTTGAAGAACCACATACCACTTCTATTTCAGAACTGGTTCAAAAGTTAAACAACTTCTCAATGAAAGGAGGGGGCGTGAAACGGGAAAGGGAGTGCGTGATGTGCCTTTCAGAGGAGATGTCGGTCGTATTCCTCCCGTGTGCTCATCAGGTTGTTTGCACAAAATGCAATGAGCTCCATGAGAAGCAGGGTATGCAAGATTGTCCTTCTTGCAGGAGCCCTATCCAGGAGCGTATATCCGTGCGTTATGCGCGTACATAA 2646 0.4403 MASLVASGNSQMSSSVSVQEKGSRNKRKFRADPPLGEPNKITPSPQHESLSYEFSAEKIDMTPSFGQVTASDLCSVSQDCSDGLKLDLGLSSPAVSSEVRPSQPKVELETFESHDADWSDLTEVQLEELVLSNLHTIFKSAIKKIVACGYTEDVATKAMLRPGICYGCKDTVSNIVDNTLAFLRNGQELDPSRDHYFDDLSQLEKYILAELVCVLREVRPFFSIGDAMWCLLICDMNVSHACAMDGDPLSSLCNDGIGDGCSSVQTESQSKLETKGPELSLPSPCNSIPSGSQSEKSLVAENSQILGGLSEKQGGANLGSHSVDKSSGASGASQSPLLQEKSASVRKVHSSSTKRDYIFRQKSIHVEKSYRTYGSKGSSRGGKLSGLSGLILDKKLKSVSESTTINLKSASLNISKAMGIDVTQDNLNADFSSNDGPSTLTSKSLDSSSTISPLAVPSSSEPEANAIPAVGSPDALSATDTDLSLSLSSKSNSTTTPICCSNKVPSSSCVGVPIVKSVGPWMPQDKKDELILKMVPRVRELQNQLQEWTEWANQKVMQAARRLSKDKAELKTLRQEKEEVDRLKKEKQCLEENTMKKLSEMENALGKAGGQVERANTAVRKLEMENAALRKEMEAAKLRAAESATGFQEVSRREKKTQMKFQSWEKQKTLLQEELMTEKNKLAQIQKENKQAEMQLEKLEARWKQAAKTKDELLMQAGSIRKEREQIEESAKSKEAMIKLEAEEELRRYRDDIQKLEKEIAQIRQKSDSSKIAALKRGIDGSFASSCADKKNGSSFEEPHTTSISELVQKLNNFSMKGGGVKRERECVMCLSEEMSVVFLPCAHQVVCTKCNELHEKQGMQDCPSCRSPIQERISVRYART 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00577 881 MobiDBLite consensus disorder prediction 433 473 - -
Car01g00577 881 MobiDBLite consensus disorder prediction 316 346 - -
Car01g00577 881 ProSiteProfiles Zinc finger RING-type profile. 827 867 IPR001841 -
Car01g00577 881 PANTHER OS05G0141500 PROTEIN 4 880 IPR046934 -
Car01g00577 881 Coils Coil 739 773 - -
Car01g00577 881 MobiDBLite consensus disorder prediction 1 20 - -
Car01g00577 881 MobiDBLite consensus disorder prediction 1 48 - -
Car01g00577 881 SUPERFAMILY RING/U-box 822 873 - -
Car01g00577 881 Coils Coil 556 600 - -
Car01g00577 881 MobiDBLite consensus disorder prediction 433 459 - -
Car01g00577 881 Pfam Zinc finger, C3HC4 type (RING finger) 824 872 - -
Car01g00577 881 Coils Coil 612 639 - -
Car01g00577 881 Coils Coil 661 716 - -
Car01g00577 881 MobiDBLite consensus disorder prediction 264 293 - -
Car01g00577 881 MobiDBLite consensus disorder prediction 316 350 - -
Car01g00577 881 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 805 877 IPR013083 -
Car01g00577 881 PANTHER OS05G0141500 PROTEIN 4 880 - -
Car01g00577 881 Pfam Family of unknown function (DUF6592) 133 244 IPR046527 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00577 Car-Chr1 4780172 4784554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00577 827 876 C3H Transcription Factor Family AT1G73950 44.000 6.48e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00577 - - gmx:100777140 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00577 01 4780172 4784554 Car01g00577 01 4780172 4784554 ECH