Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00559 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGGTATTGCTGAGAAGAAAATGGAAAGCAAAGATTTCGCAGGGGCTCGAACATTTGTCCTTAAGGCTCGAAAATTATATCCTGATCTGGAGAATATTGCTCAAATGCTTGTTGTTTGTGATGTGCATTGCTTTGCTGAGCAGAAATTACTGGGTAATGTGATGGACTGCTATAAAATATTACAAATTGATCGTAATGCTAATGAAGCAATAATTAAGAAGCAATACAAGAAGTTGGCTCTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTCAAGCTGATTGGGGAAGCTCAGAGAGTTCTTTTGGATAGAGACAAACGATCTTCACTTGACATGAACTTGAGCAGGTTTTCAATGATCAGAACTGCCATGCCATCTCATCATCAACGGAATGTTCAGGTAAATTTTAATCCCGTGATGCAAACCAATGTCCGGCCCATTTTCACAAACTTAAATCTACAGCAGCAACATCAGTCTAGACAGCCAACTCAGCAGGGGATTAATGTTGGCGCTTCTAGTTTTTGGACTATGTGCTCATTTTGTAAAGTAAGGTATGAGTATCCCAGGGCATATTTAAATAGATCTCTTCGCTGTCAACAATGCGGTAAGCCCTTCATTGCATATGAGGTGGACTTGCAAAGTACCAAACCGGCAACTAATCCAAGTCAGCAGGTTTTTGGCCAGCAGAACAGTATTCCGAATGATGGTGCTTTTAAGGTCGGTGTTGGATCTCAAGGTAATTTGCATGCTCAGAGGTCCAATACAAAATCTGATCATAAAAAAGGCTCTACTTCTAATGTCTCTGAAAAGTCAAATGGAAAGAGAAGAAGGAAACAGGTAGTAGAATCCAGTGAAAGCTCTGAGTCTATAGGCAGCACTGATTCTGAAGATGATACGTTTTCTGACAACAATGTTTTTCCTGGTGTGTCAACTTATAGAGAAGAGTGTCCACGTAGATCTACACGGAGAAAACACCAGGTTTCCTACAACGAGAATGTTAGTGACGAAGACAATGAGCCGCTGCAACCTTTAAAACAGGGTCAGGGGAGTGGTTCACCATACAGCGATGGTGAAAATAATGGGGAGGAAACCGAAATGAAGGATCAGAATGGTGAGGCTGCTGGTCTGAAAGATGATCAGAAAGAGGTAAAGAGGAAGCAAAATTTTTATTCTGAAGAGAGCTCAGTAAATATAGATATGAAAATTAAGGAGGTGAGAGGAACAGAAACAGGGGGCAGCTCAGATACAGATGAACCATTGGAGCATTCAGCCTCTAAATCAACAAATTATCTAGATGGTTTAGTTTATCCAGATCCAGAGTTCAGTGACTTTGACAAGGACAAGAAAGAGGAGTGTTTTGCTTCCGGGCAGGTTTGGGCTGTTTATGATGATATAGATGGCATGCCTAGATTCTATGCTATAATCAAAACAGTTTCTTCTCCTGGATTTAAGTTGCGGATAGCTTGGTTTGAGCCAGATCCAGACGACAAAGATGAACGCAAGTGGGTTGATGAGAAACTGCCAAGTGCTTGTGGGAAATATAAACTTGGTAAGACTATAACCACCGAAGATCATTTGATGTTCTCTCATGTGACTTGTTTTGAAAAGATTAGCCGCTCTACTTTTAAAGTGTATCCCAGAAAGGGGGAAACTTGGGCTCTTTTTAAAAATTGGGATATTAAATGGTACATGGATGCAGAATCTCATGAGAAGTATGATTTGGAGTTTGTTGAGATCTTGTCGGATTATGTTGAAGGCGCGGGAGTAATTGTTGCATACTTGGCTAAGTTGAAAGGTTTTGTGAGCCTCTTCTCTCGAACTATGAAGGGAAGTAATTGCTCATTTCGAATTCCACCAGTTGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTATAAAATGACTGGTCAAGAAAGAACTGGTGTTCCTGTAGGATCTTATGAACTTGATCCTGTATCCTTGCCAGTGAATCTGGAAGAGATTGTTTCTCCATCTGTAGGGATGAGCCCAAGGTCTTCAGATATGTCGAAATTCACGAAGGGTCTGGATGGAGATGCATCCACGGTCAAGGTTAATTTGGATAGAAGCAAATCAGTAGAGGAGAAGAAGGATCCTGTTGGTCATATTGATGATGTTGGAGCTCCTTCAGCTTCAGTCAAAGATTCTTTTGAAGTTCCAGATCCTATGTTCTACCAATTTGATGCTGAGAGGTCCCATGAAAAGTTTGAGGTTGGCCAGATTTGGGCATTTTATGGTGATAGTGATGGACTTCCAAAATACTACGGTCAGATTAAAGGGGTTAAGAGGACTAGCCCAGAAATCGAGTTGCAAGTTATTTATCTTACTAGCTGCTGGCTACCTAGGAAAGTTGATAGGTGGGACGATGTGGGTATGATCATCTCCTGTGGAAGATTTAAAATCAAAGAAAGTGCTAAGGCGTGTACTTACAGAAACACCTGTTCTGTTTCACATCAGGTGCACACTAGAACTGCTGGTAAGAACAAGGAATATGAAATTTTTCCTCGGAAGGGTGAAATTTGGGCACTGTATAGGGATTGGACGCATAAAATCAAACGTTCTGATTTGCCAAACTGCGAATATGACATAGTGGAAGTTGTTGAAGTGAGTGATGGTTGGATAGATGTTTTATATCTGGAGAAGGTAAGTGGTTACAGTTCAGTTTTTAAGGGCAAATTAAATAACAAACGATTGACGACGATTACAATCTCTAGGACCGAGTTGCTGAAATTCTCCCACAAGATCCCTGCTTTCAAACTGACAGAAGAACATGACAATCTTAGAGGATTTTGGGAACTTGATCCGAGAGCAATACCACATCATTATTTTATTGGCTACAAGAAATGA 2916 0.4084 MDCNKEEALRAKGIAEKKMESKDFAGARTFVLKARKLYPDLENIAQMLVVCDVHCFAEQKLLGNVMDCYKILQIDRNANEAIIKKQYKKLALQLHPDKNKFAGAEAAFKLIGEAQRVLLDRDKRSSLDMNLSRFSMIRTAMPSHHQRNVQVNFNPVMQTNVRPIFTNLNLQQQHQSRQPTQQGINVGASSFWTMCSFCKVRYEYPRAYLNRSLRCQQCGKPFIAYEVDLQSTKPATNPSQQVFGQQNSIPNDGAFKVGVGSQGNLHAQRSNTKSDHKKGSTSNVSEKSNGKRRRKQVVESSESSESIGSTDSEDDTFSDNNVFPGVSTYREECPRRSTRRKHQVSYNENVSDEDNEPLQPLKQGQGSGSPYSDGENNGEETEMKDQNGEAAGLKDDQKEVKRKQNFYSEESSVNIDMKIKEVRGTETGGSSDTDEPLEHSASKSTNYLDGLVYPDPEFSDFDKDKKEECFASGQVWAVYDDIDGMPRFYAIIKTVSSPGFKLRIAWFEPDPDDKDERKWVDEKLPSACGKYKLGKTITTEDHLMFSHVTCFEKISRSTFKVYPRKGETWALFKNWDIKWYMDAESHEKYDLEFVEILSDYVEGAGVIVAYLAKLKGFVSLFSRTMKGSNCSFRIPPVELFRFSHRVPSYKMTGQERTGVPVGSYELDPVSLPVNLEEIVSPSVGMSPRSSDMSKFTKGLDGDASTVKVNLDRSKSVEEKKDPVGHIDDVGAPSASVKDSFEVPDPMFYQFDAERSHEKFEVGQIWAFYGDSDGLPKYYGQIKGVKRTSPEIELQVIYLTSCWLPRKVDRWDDVGMIISCGRFKIKESAKACTYRNTCSVSHQVHTRTAGKNKEYEIFPRKGEIWALYRDWTHKIKRSDLPNCEYDIVEVVEVSDGWIDVLYLEKVSGYSSVFKGKLNNKRLTTITISRTELLKFSHKIPAFKLTEEHDNLRGFWELDPRAIPHHYFIGYKK 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00559 971 Coils Coil 383 403 - -
Car01g00559 971 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Car01g00559 971 MobiDBLite consensus disorder prediction 332 349 - -
Car01g00559 971 Pfam DnaJ domain 67 128 IPR001623 -
Car01g00559 971 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 967 - -
Car01g00559 971 MobiDBLite consensus disorder prediction 417 443 - -
Car01g00559 971 CDD DnaJ 67 120 IPR001623 -
Car01g00559 971 Pfam Domain of unknown function (DUF3444) 738 946 IPR024593 -
Car01g00559 971 Pfam Domain of unknown function (DUF3444) 452 655 IPR024593 -
Car01g00559 971 MobiDBLite consensus disorder prediction 350 376 - -
Car01g00559 971 MobiDBLite consensus disorder prediction 377 405 - -
Car01g00559 971 SMART dnaj_3 66 123 IPR001623 -
Car01g00559 971 SUPERFAMILY Chaperone J-domain 64 137 IPR036869 -
Car01g00559 971 MobiDBLite consensus disorder prediction 236 405 - -
Car01g00559 971 MobiDBLite consensus disorder prediction 270 300 - -
Car01g00559 971 Gene3D DnaJ domain 65 180 IPR036869 -
Car01g00559 971 MobiDBLite consensus disorder prediction 236 252 - -
Car01g00559 971 PANTHER - 1 967 - -
Car01g00559 971 MobiDBLite consensus disorder prediction 301 325 - -
Car01g00559 971 PRINTS DnaJ domain signature 69 87 IPR001623 -
Car01g00559 971 PRINTS DnaJ domain signature 87 102 IPR001623 -
Car01g00559 971 PRINTS DnaJ domain signature 103 123 IPR001623 -
Car01g00559 971 MobiDBLite consensus disorder prediction 417 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00559 Car-Chr1 4567498 4572500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00559 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.934 1.61e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00559 - - cam:101500991 1969.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00559 01 4567498 4572500 Car01g00559 01 4567498 4572500 ECH
Car07g00611 07 5339556 5344663 Car01g00559 01 4567498 4572500 PCT