Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00558 ATGCATCTACAATACGAAGACAAATGCAATACAATTACCGTGTACAAAGGCAGGAAGAAGAAGACCATTGAGTATTTCGCCATCAAAAGCGTCGATAAGTCTCAGAAAACCAAGGTTCTTCAAGAAGTCAGGATTCTTCACACTTTAGATCACCAAAATGTGCTCAAGTTTTATTCATGGTATGAAACTTCTGCTCACCTGTGGTTGGTTTTGGAGTATTGTGTTGGAGGGGATCTACTTTCCATATTGCGGCAGGATAGTCAGCTTCCTGAAGATTCTGTTACCGAACTTGCTTGTGACCTTGTCAGAGCTTTGCAGTATTTACATTCAAATGGAATAATTTATTGTGACCTGAAACCATCAAATATTCTACTAGATGAAAATGGATGTGGAAAGCTCTGTGATTTCGGTTTGGCCAGAAAGCTAAAAGAGATATCAAAAGTTCCTTCTTCCTCGTTGCCTCAAGCAAAACGTGGAACACCCTCTTACATGGCTCCTGAGCTTTTTGAGGATGGTGGAGTGCATTCTTATGCTTCTGATTTCTGGGCTTTAGGCTGTGTACTATATGAATGTTATGCTGGGAAGCCTCCTTTTGTAGGAAGAGAATTCACTCAGCTTGTAAAATCCATCATTTCAGATCCGACTCCACCTCTCCCTGGCAATCCAAGTCGTCCTTTTGTCAATCTAATAAATTCTCTGTTGGTCAAAGATCCAGCTGAAAGAATAAAATGGCCTGAGCTTTGTGGACATGCCGTTTGGAAAACTAAATTCACTCTAGTGCCTCTTCCTCCTCAACCTGCATTTGATTATATGATAGAGCTACATGCTAAACCATGCTTATCAGAACGTAATGGAGATAAATCTTCTCATAATAGGACCCCTCCCAAATATCGTGAAAAAGATGTGAAAGGGATGCTAAAGAAGGATGAAAATTCTGGTTTAGGATCTAGAGGCATTGAGACACCAACAAGGGCAACACCAAATGGTCACAGAACACAGACAAAGGGTTCTGGCCGAACAATTGAGGTGAAGCAGAAAGATTCTTCCATTATTAACAAGGGTTTGAATCTTTTGAGACTATCAAGAATAGCAAAATCAAATTTGCAAAAAGAAAACGAGAAAGAAAATTATCGACGTCCCTTGCCCAATGGCTCTGAGAAGGATACCGATGTTAAAATTGAGAACACCGACATGGAACTTGATTTTAACGAGAATAGTGAAGAGGATGCACTTGAAGAACCTGATGGTTCTGAACATACACCTTCGGTGCCCAATGAGAAAATGGAGATTAATTTTCAGAATCAGGGAAAAGTAGAGGAGACTGAGAACAATATACACCGGTTGGACACCCCATCTGTTACTACTCCTGCCTCAAATGATCCAAGGTCATTTGATCACGAGTCAACTCCTGACAGTTCTGACATATCTGTTATTTCTCCTAGTGTGAGCCCTCTAGTGAAGAAACAGAGACCTAAAGAAGACTTAGGATCTGGCTTTGACTCTGATTATTCGAGATCGTCTAACGACATCTCCCAGGTTATTTGGCATCCATCTGATCTCTCAGTGAGACCTGTAATGCCCAGCAGAAAAGTTGACAAAGGCTTAGAAGTCATTCCTTCACTTCCTTTTGAGGCGTTGCAAGCACCTGATTTTGTCAAGATGCCTAAAGAGCAACTGGAGGCAGTCCTTAACCGAATTATAGCCATCCTGAATGGGAATACTAGCATTGGAGAGAGACAAAATGTGGTTAGGTACCTCGAGATGTTGAGCAGTAATGCTGATGCAGCCAATATCTTGACCAATGGGCCAATAATGCTCATTCTCATAAAGTTGCTGCGTCAATCCAAGGCATCAGCTTTACGTCTTCAACTTGCTTCACTGATCGGTCTGTTGATTAGACACTCTACTTTTGTTGACGACAGTTTGGCTAACTCTGGAATTCTAGGTTCACTGACTGATGGCCTTAGAGACAGACATGAAAAAGTGAGGAGGTTTTCTATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCCACCCAAAATGCGGACTCTAAGGATAGCACTCCACTTGAATCTCCATCAAAGGACAATAGGACTGCGAATGGCTGGCAGGTTCCAAATTCATTGATTTCTTTTGTGTCATCAATATTGAGGAAAGGAGAGGATGATATTACTCAATTGTACGCATTGAGAACAATTGAGAATATTTGCAGTCAAGGAGGGGTCTGGGTGGGACGTTTGGCCAGTCAAGATGTTATTAGTAATCTCTGTTATATCTATAGAGCGGCAGGAAAACAGGAAAGTATGAGGCTAACTGCAGGATCATGTTTAGTGCGCTTAGTTCGTTTTAATCCTCCTAGCGTTCAGTCTGTTATAGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAAGGAAGTCCACGAGAGCAGCAAATCATCTTAAATCTTCTTAACATGGCAATGCTTGGAAGTCATATGTTCACAAATGTTGGAAGATTCGTTGTACCACTTGcagaggagaagaatctgatcccaagtcttttggctcttgttgagcagggtagtgaagttttaaaaggaaaggcacttgtctttgtggctctcctctgtaagcacggtaggaggtggcttccacagtttttttgtagtcataagttactttcagtggtggacaggctgggaaaagagaaggatgcctttgtgcggcagtgtttagatgcatttctacatattgtggcatctacaattccaggtttacttgatataataacgggggatatccaacaaatgatgggaggaaggcgccacggacatatctcttcccttaccagcagatctgctccaaaagctaacattaatttgtttcctgttgtcctccatcttctcgaaagttcagcttttaagcacaaagtggcaacatttccagtgctacggcagttggcgaatctgattaaactcgtggaggctccgttccagGGAAGAGACGAGTTCCAAATAACCCTGCTTCGAATTTTAGAGTCTCTCACGGAGGAAACTTCTGTGATCCTTGGCAATCCTGACATTTTCATACGTGAAATCCTTCCTAGTTTGACAGTTCTCTACAAGGGTAATAAGGATGGTGATGCCAGGTTTTTGTGCCTTAAAATATTTTTCGACGTGATGATTATTCTCTTGAGCGAACCAATTGAAGAGGAGCAAAGATTAACTGATCTGAAATTCGTATCAAATACACATTTTCTTCCTCTCTACCCAACCTTGATCGAGGATGAAGATCCTATTCCTATCTTTGCACAGAAACTTCTTGTCATGCTACTAGAGTTCAGTTTTATTTCGATTCCAGACATTCTACATCTGAAGACAATTTCACAATGCTTTGAGTTCTTGCTTGGTGATCTGTCAAATGCAAACGTGAATAATGTTAAGCTGTGTCTTGCTCTGGCTTCTGCTCCTGAAATGGAATCCAAGTTGCTCTCTCAATTGAAAGTAGTTAGGAGAATTGGCAACTTTCTTGAGTTTGTATGTGCAAAGGGTATGGAAGATTTGCTGGAACCAACTCTTGGGCTATGTAGAGCCTTTCTAGCACGTTCAGTCAGCTGGACAAAAGGCTTCAGCTATACAACAGAACCAACTCTCTTACGTGATTGTCCTCCTGAGGTGTGTGGCGCCGTTGATCCCCAACAATACATAAGGGATATAACAGACTTTGGAAGCAATGTTGGTGTTTTTCTAGAACTGAGTGCTTTGAGAGAGACCAGTATTGCTGATATAGCTTCTCAGTGTGTGGTTTTACTCCTCAAGGCTGCTCCTAGAGAAGCAACCACTGGTCTACTAACCAATTTGCCCAAGGTCACTGTGATCCTAGAATCTTGGAGTAAAGGAATCCCTCACTTAACGGTGCAGAGAATGCTTCATGCTTTAGGTTATGCTTGCAAGCAGTACTTATTGCATGCAATGATATTATCAATATCTATACCAGAGATTTCAAGAATTGAAGTGGTAGTTTCTGAGCTCAAGAGTTCAAGTGTGCCTGCTTTAGCCAAAACTGCTGGTTTGGCAGCCTTGGAATTGCAGCGGCTACCTCGCTGCATCTGA 4098 0.368 MHLQYEDKCNTITVYKGRKKKTIEYFAIKSVDKSQKTKVLQEVRILHTLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVTELACDLVRALQYLHSNGIIYCDLKPSNILLDENGCGKLCDFGLARKLKEISKVPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGKPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIKWPELCGHAVWKTKFTLVPLPPQPAFDYMIELHAKPCLSERNGDKSSHNRTPPKYREKDVKGMLKKDENSGLGSRGIETPTRATPNGHRTQTKGSGRTIEVKQKDSSIINKGLNLLRLSRIAKSNLQKENEKENYRRPLPNGSEKDTDVKIENTDMELDFNENSEEDALEEPDGSEHTPSVPNEKMEINFQNQGKVEETENNIHRLDTPSVTTPASNDPRSFDHESTPDSSDISVISPSVSPLVKKQRPKEDLGSGFDSDYSRSSNDISQVIWHPSDLSVRPVMPSRKVDKGLEVIPSLPFEALQAPDFVKMPKEQLEAVLNRIIAILNGNTSIGERQNVVRYLEMLSSNADAANILTNGPIMLILIKLLRQSKASALRLQLASLIGLLIRHSTFVDDSLANSGILGSLTDGLRDRHEKVRRFSMAALGELLFYISTQNADSKDSTPLESPSKDNRTANGWQVPNSLISFVSSILRKGEDDITQLYALRTIENICSQGGVWVGRLASQDVISNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPPSVQSVIEKLSFKDLASALVKGSPREQQIILNLLNMAMLGSHMFTNVGRFVVPLAEEKNLIPSLLALVEQGSEVLKGKALVFVALLCKHGRRWLPQFFCSHKLLSVVDRLGKEKDAFVRQCLDAFLHIVASTIPGLLDIITGDIQQMMGGRRHGHISSLTSRSAPKANINLFPVVLHLLESSAFKHKVATFPVLRQLANLIKLVEAPFQGRDEFQITLLRILESLTEETSVILGNPDIFIREILPSLTVLYKGNKDGDARFLCLKIFFDVMIILLSEPIEEEQRLTDLKFVSNTHFLPLYPTLIEDEDPIPIFAQKLLVMLLEFSFISIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVCAKGMEDLLEPTLGLCRAFLARSVSWTKGFSYTTEPTLLRDCPPEVCGAVDPQQYIRDITDFGSNVGVFLELSALRETSIADIASQCVVLLLKAAPREATTGLLTNLPKVTVILESWSKGIPHLTVQRMLHALGYACKQYLLHAMILSISIPEISRIEVVVSELKSSSVPALAKTAGLAALELQRLPRCI 1365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00558 1365 MobiDBLite consensus disorder prediction 369 425 - -
Car01g00558 1365 SUPERFAMILY Protein kinase-like (PK-like) 13 280 IPR011009 -
Car01g00558 1365 SMART serkin_6 6 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00558 1365 MobiDBLite consensus disorder prediction 400 414 - -
Car01g00558 1365 MobiDBLite consensus disorder prediction 281 314 - -
Car01g00558 1365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Car01g00558 1365 Pfam Protein kinase domain 13 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00558 1365 SUPERFAMILY ARM repeat 560 915 IPR016024 -
Car01g00558 1365 Gene3D Transferase(Phosphotransferase) domain 1 9 298 - -
Car01g00558 1365 MobiDBLite consensus disorder prediction 440 506 - -
Car01g00558 1365 MobiDBLite consensus disorder prediction 369 399 - -
Car01g00558 1365 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 13 1362 IPR044591 GO:0000911|GO:0000914|GO:0008017
Car01g00558 1365 MobiDBLite consensus disorder prediction 447 463 - -
Car01g00558 1365 CDD STKc_ULK4 13 253 - -
Car01g00558 1365 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00558 1365 Gene3D - 550 914 IPR011989 -
Car01g00558 1365 MobiDBLite consensus disorder prediction 281 345 - -
Car01g00558 1365 MobiDBLite consensus disorder prediction 316 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00558 Car-Chr1 4558655 4566729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00558 14 242 AGC Kinase Gene Family AT1G45160 34.749 5.85e-33 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Car01g00558 Pkinase 4.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00558 K17545 - gmx:100777288 2326.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00558 01 4558655 4566729 Car01g00558 01 4558655 4566729 ECH