Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g00558 | ATGCATCTACAATACGAAGACAAATGCAATACAATTACCGTGTACAAAGGCAGGAAGAAGAAGACCATTGAGTATTTCGCCATCAAAAGCGTCGATAAGTCTCAGAAAACCAAGGTTCTTCAAGAAGTCAGGATTCTTCACACTTTAGATCACCAAAATGTGCTCAAGTTTTATTCATGGTATGAAACTTCTGCTCACCTGTGGTTGGTTTTGGAGTATTGTGTTGGAGGGGATCTACTTTCCATATTGCGGCAGGATAGTCAGCTTCCTGAAGATTCTGTTACCGAACTTGCTTGTGACCTTGTCAGAGCTTTGCAGTATTTACATTCAAATGGAATAATTTATTGTGACCTGAAACCATCAAATATTCTACTAGATGAAAATGGATGTGGAAAGCTCTGTGATTTCGGTTTGGCCAGAAAGCTAAAAGAGATATCAAAAGTTCCTTCTTCCTCGTTGCCTCAAGCAAAACGTGGAACACCCTCTTACATGGCTCCTGAGCTTTTTGAGGATGGTGGAGTGCATTCTTATGCTTCTGATTTCTGGGCTTTAGGCTGTGTACTATATGAATGTTATGCTGGGAAGCCTCCTTTTGTAGGAAGAGAATTCACTCAGCTTGTAAAATCCATCATTTCAGATCCGACTCCACCTCTCCCTGGCAATCCAAGTCGTCCTTTTGTCAATCTAATAAATTCTCTGTTGGTCAAAGATCCAGCTGAAAGAATAAAATGGCCTGAGCTTTGTGGACATGCCGTTTGGAAAACTAAATTCACTCTAGTGCCTCTTCCTCCTCAACCTGCATTTGATTATATGATAGAGCTACATGCTAAACCATGCTTATCAGAACGTAATGGAGATAAATCTTCTCATAATAGGACCCCTCCCAAATATCGTGAAAAAGATGTGAAAGGGATGCTAAAGAAGGATGAAAATTCTGGTTTAGGATCTAGAGGCATTGAGACACCAACAAGGGCAACACCAAATGGTCACAGAACACAGACAAAGGGTTCTGGCCGAACAATTGAGGTGAAGCAGAAAGATTCTTCCATTATTAACAAGGGTTTGAATCTTTTGAGACTATCAAGAATAGCAAAATCAAATTTGCAAAAAGAAAACGAGAAAGAAAATTATCGACGTCCCTTGCCCAATGGCTCTGAGAAGGATACCGATGTTAAAATTGAGAACACCGACATGGAACTTGATTTTAACGAGAATAGTGAAGAGGATGCACTTGAAGAACCTGATGGTTCTGAACATACACCTTCGGTGCCCAATGAGAAAATGGAGATTAATTTTCAGAATCAGGGAAAAGTAGAGGAGACTGAGAACAATATACACCGGTTGGACACCCCATCTGTTACTACTCCTGCCTCAAATGATCCAAGGTCATTTGATCACGAGTCAACTCCTGACAGTTCTGACATATCTGTTATTTCTCCTAGTGTGAGCCCTCTAGTGAAGAAACAGAGACCTAAAGAAGACTTAGGATCTGGCTTTGACTCTGATTATTCGAGATCGTCTAACGACATCTCCCAGGTTATTTGGCATCCATCTGATCTCTCAGTGAGACCTGTAATGCCCAGCAGAAAAGTTGACAAAGGCTTAGAAGTCATTCCTTCACTTCCTTTTGAGGCGTTGCAAGCACCTGATTTTGTCAAGATGCCTAAAGAGCAACTGGAGGCAGTCCTTAACCGAATTATAGCCATCCTGAATGGGAATACTAGCATTGGAGAGAGACAAAATGTGGTTAGGTACCTCGAGATGTTGAGCAGTAATGCTGATGCAGCCAATATCTTGACCAATGGGCCAATAATGCTCATTCTCATAAAGTTGCTGCGTCAATCCAAGGCATCAGCTTTACGTCTTCAACTTGCTTCACTGATCGGTCTGTTGATTAGACACTCTACTTTTGTTGACGACAGTTTGGCTAACTCTGGAATTCTAGGTTCACTGACTGATGGCCTTAGAGACAGACATGAAAAAGTGAGGAGGTTTTCTATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCCACCCAAAATGCGGACTCTAAGGATAGCACTCCACTTGAATCTCCATCAAAGGACAATAGGACTGCGAATGGCTGGCAGGTTCCAAATTCATTGATTTCTTTTGTGTCATCAATATTGAGGAAAGGAGAGGATGATATTACTCAATTGTACGCATTGAGAACAATTGAGAATATTTGCAGTCAAGGAGGGGTCTGGGTGGGACGTTTGGCCAGTCAAGATGTTATTAGTAATCTCTGTTATATCTATAGAGCGGCAGGAAAACAGGAAAGTATGAGGCTAACTGCAGGATCATGTTTAGTGCGCTTAGTTCGTTTTAATCCTCCTAGCGTTCAGTCTGTTATAGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAAGGAAGTCCACGAGAGCAGCAAATCATCTTAAATCTTCTTAACATGGCAATGCTTGGAAGTCATATGTTCACAAATGTTGGAAGATTCGTTGTACCACTTGcagaggagaagaatctgatcccaagtcttttggctcttgttgagcagggtagtgaagttttaaaaggaaaggcacttgtctttgtggctctcctctgtaagcacggtaggaggtggcttccacagtttttttgtagtcataagttactttcagtggtggacaggctgggaaaagagaaggatgcctttgtgcggcagtgtttagatgcatttctacatattgtggcatctacaattccaggtttacttgatataataacgggggatatccaacaaatgatgggaggaaggcgccacggacatatctcttcccttaccagcagatctgctccaaaagctaacattaatttgtttcctgttgtcctccatcttctcgaaagttcagcttttaagcacaaagtggcaacatttccagtgctacggcagttggcgaatctgattaaactcgtggaggctccgttccagGGAAGAGACGAGTTCCAAATAACCCTGCTTCGAATTTTAGAGTCTCTCACGGAGGAAACTTCTGTGATCCTTGGCAATCCTGACATTTTCATACGTGAAATCCTTCCTAGTTTGACAGTTCTCTACAAGGGTAATAAGGATGGTGATGCCAGGTTTTTGTGCCTTAAAATATTTTTCGACGTGATGATTATTCTCTTGAGCGAACCAATTGAAGAGGAGCAAAGATTAACTGATCTGAAATTCGTATCAAATACACATTTTCTTCCTCTCTACCCAACCTTGATCGAGGATGAAGATCCTATTCCTATCTTTGCACAGAAACTTCTTGTCATGCTACTAGAGTTCAGTTTTATTTCGATTCCAGACATTCTACATCTGAAGACAATTTCACAATGCTTTGAGTTCTTGCTTGGTGATCTGTCAAATGCAAACGTGAATAATGTTAAGCTGTGTCTTGCTCTGGCTTCTGCTCCTGAAATGGAATCCAAGTTGCTCTCTCAATTGAAAGTAGTTAGGAGAATTGGCAACTTTCTTGAGTTTGTATGTGCAAAGGGTATGGAAGATTTGCTGGAACCAACTCTTGGGCTATGTAGAGCCTTTCTAGCACGTTCAGTCAGCTGGACAAAAGGCTTCAGCTATACAACAGAACCAACTCTCTTACGTGATTGTCCTCCTGAGGTGTGTGGCGCCGTTGATCCCCAACAATACATAAGGGATATAACAGACTTTGGAAGCAATGTTGGTGTTTTTCTAGAACTGAGTGCTTTGAGAGAGACCAGTATTGCTGATATAGCTTCTCAGTGTGTGGTTTTACTCCTCAAGGCTGCTCCTAGAGAAGCAACCACTGGTCTACTAACCAATTTGCCCAAGGTCACTGTGATCCTAGAATCTTGGAGTAAAGGAATCCCTCACTTAACGGTGCAGAGAATGCTTCATGCTTTAGGTTATGCTTGCAAGCAGTACTTATTGCATGCAATGATATTATCAATATCTATACCAGAGATTTCAAGAATTGAAGTGGTAGTTTCTGAGCTCAAGAGTTCAAGTGTGCCTGCTTTAGCCAAAACTGCTGGTTTGGCAGCCTTGGAATTGCAGCGGCTACCTCGCTGCATCTGA | 4098 | 0.368 | MHLQYEDKCNTITVYKGRKKKTIEYFAIKSVDKSQKTKVLQEVRILHTLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVTELACDLVRALQYLHSNGIIYCDLKPSNILLDENGCGKLCDFGLARKLKEISKVPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGKPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIKWPELCGHAVWKTKFTLVPLPPQPAFDYMIELHAKPCLSERNGDKSSHNRTPPKYREKDVKGMLKKDENSGLGSRGIETPTRATPNGHRTQTKGSGRTIEVKQKDSSIINKGLNLLRLSRIAKSNLQKENEKENYRRPLPNGSEKDTDVKIENTDMELDFNENSEEDALEEPDGSEHTPSVPNEKMEINFQNQGKVEETENNIHRLDTPSVTTPASNDPRSFDHESTPDSSDISVISPSVSPLVKKQRPKEDLGSGFDSDYSRSSNDISQVIWHPSDLSVRPVMPSRKVDKGLEVIPSLPFEALQAPDFVKMPKEQLEAVLNRIIAILNGNTSIGERQNVVRYLEMLSSNADAANILTNGPIMLILIKLLRQSKASALRLQLASLIGLLIRHSTFVDDSLANSGILGSLTDGLRDRHEKVRRFSMAALGELLFYISTQNADSKDSTPLESPSKDNRTANGWQVPNSLISFVSSILRKGEDDITQLYALRTIENICSQGGVWVGRLASQDVISNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPPSVQSVIEKLSFKDLASALVKGSPREQQIILNLLNMAMLGSHMFTNVGRFVVPLAEEKNLIPSLLALVEQGSEVLKGKALVFVALLCKHGRRWLPQFFCSHKLLSVVDRLGKEKDAFVRQCLDAFLHIVASTIPGLLDIITGDIQQMMGGRRHGHISSLTSRSAPKANINLFPVVLHLLESSAFKHKVATFPVLRQLANLIKLVEAPFQGRDEFQITLLRILESLTEETSVILGNPDIFIREILPSLTVLYKGNKDGDARFLCLKIFFDVMIILLSEPIEEEQRLTDLKFVSNTHFLPLYPTLIEDEDPIPIFAQKLLVMLLEFSFISIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVCAKGMEDLLEPTLGLCRAFLARSVSWTKGFSYTTEPTLLRDCPPEVCGAVDPQQYIRDITDFGSNVGVFLELSALRETSIADIASQCVVLLLKAAPREATTGLLTNLPKVTVILESWSKGIPHLTVQRMLHALGYACKQYLLHAMILSISIPEISRIEVVVSELKSSSVPALAKTAGLAALELQRLPRCI | 1365 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g00558 | 1365 | MobiDBLite | consensus disorder prediction | 369 | 425 | - | - | |
Car01g00558 | 1365 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 280 | IPR011009 | - | |
Car01g00558 | 1365 | SMART | serkin_6 | 6 | 253 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car01g00558 | 1365 | MobiDBLite | consensus disorder prediction | 400 | 414 | - | - | |
Car01g00558 | 1365 | MobiDBLite | consensus disorder prediction | 281 | 314 | - | - | |
Car01g00558 | 1365 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 113 | 125 | IPR008271 | GO:0004672|GO:0006468 | |
Car01g00558 | 1365 | Pfam | Protein kinase domain | 13 | 251 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car01g00558 | 1365 | SUPERFAMILY | ARM repeat | 560 | 915 | IPR016024 | - | |
Car01g00558 | 1365 | Gene3D | Transferase(Phosphotransferase) domain 1 | 9 | 298 | - | - | |
Car01g00558 | 1365 | MobiDBLite | consensus disorder prediction | 440 | 506 | - | - | |
Car01g00558 | 1365 | MobiDBLite | consensus disorder prediction | 369 | 399 | - | - | |
Car01g00558 | 1365 | PANTHER | SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED | 13 | 1362 | IPR044591 | GO:0000911|GO:0000914|GO:0008017 | |
Car01g00558 | 1365 | MobiDBLite | consensus disorder prediction | 447 | 463 | - | - | |
Car01g00558 | 1365 | CDD | STKc_ULK4 | 13 | 253 | - | - | |
Car01g00558 | 1365 | ProSiteProfiles | Protein kinase domain profile. | 1 | 253 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car01g00558 | 1365 | Gene3D | - | 550 | 914 | IPR011989 | - | |
Car01g00558 | 1365 | MobiDBLite | consensus disorder prediction | 281 | 345 | - | - | |
Car01g00558 | 1365 | MobiDBLite | consensus disorder prediction | 316 | 345 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car01g00558 | Car-Chr1 | 4558655 | 4566729 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car01g00558 | 14 | 242 | AGC Kinase Gene Family | AT1G45160 | 34.749 | 5.85e-33 | 137 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | ULK_ULK4 | Car01g00558 | Pkinase | 4.3e-60 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g00558 | K17545 | - | gmx:100777288 | 2326.98 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car01g00558 | 01 | 4558655 | 4566729 | Car01g00558 | 01 | 4558655 | 4566729 | ECH |