Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00537 ATGTTCGCATATCATCGCAGAGCCTTGCTCTGCCCTAATCTCAACCCCATCCTCAGATTCAAAACCCTAACACTCTCTTCGTTTATTCTAATACAACCCTTTTCCACATCCCAAAACCCCTCTTTCACAATCAACTACCTCATTCAAAATCTCCAATTTTCCCCACAAACCGCTTCCAAACTCTCCACCCAAATCAATTTCACCGACTCAACCAAACCCGATTCAGTTCTCGCTTTATTCAAAACCTATGGCTTCACAAATCCCCAATTATCTTCCCTCGTCAAAACATACCCAAAAATCCTCTCTTTCGATCCCAACAAAACCATTCTCCCTAAACTCAATTTCCTTCTCTCAAAGGGTGCTTCAAATTCTGACCTTGTTCACATCGTCGCTAAAAACCCTCTCTTTTTAAGCCAAAGCTTGAAAAATACCATGACCCCATGTTACAATTTCGTCAACAAATTCTTATTTTCTGATGAATTAACCATGCTCTCTATTAAATCATGTGCTGCAATTATCTATTCTAAATACCCAGCTAAGAATATTAAACTTTTGCGTCAAATTGGTGTCCCTAAATCGAGAATTGCTCTTACACTTCGTCATTGGCCTTGCACTGTTATTGGGAGTCCAACTATATTTGAAAAGGCTGTGAAAGAGGTGCGGGAATTAGGATTCAAACCTAAAACGACGTTCTTCATCGTGGCGTTGCGTGCTAAGGTTCTTCCAAAATCCCTTTGGGAAGAGAAGGTTGATTTGTTTAAGAAATGGGGTTGGTCTGAGGATGTTCTTGTTTCAGCTTTTTTGAAGTATCCATGGTGTATGCTTGCATCTGTTGATAAAATTGAGACAGTGATGAAGTATTTTGTTAACCACATGGGTTGGGATTCTCTTGTTGTTGCTAAAAATCCAATTCTTATTATGTTAAGTTTGGAGAAAAGGATTATTCCTAGGGCTTCTGTTTTGCAGTTTCTTGAATCTAGAGGTTTGATTAAGGAGGGTAATACATGGATTTCGCCTTTCAAAGCTACTGAGAAGGTGTTTTTGGAGAGATTTGTTCATTGTTTTGAGGAGGAAAGTTCTCAGCTGTTGAAGTTGTATAAAGAGAATAGAAGTATTCCAACATAG 1125 0.3884 MFAYHRRALLCPNLNPILRFKTLTLSSFILIQPFSTSQNPSFTINYLIQNLQFSPQTASKLSTQINFTDSTKPDSVLALFKTYGFTNPQLSSLVKTYPKILSFDPNKTILPKLNFLLSKGASNSDLVHIVAKNPLFLSQSLKNTMTPCYNFVNKFLFSDELTMLSIKSCAAIIYSKYPAKNIKLLRQIGVPKSRIALTLRHWPCTVIGSPTIFEKAVKEVRELGFKPKTTFFIVALRAKVLPKSLWEEKVDLFKKWGWSEDVLVSAFLKYPWCMLASVDKIETVMKYFVNHMGWDSLVVAKNPILIMLSLEKRIIPRASVLQFLESRGLIKEGNTWISPFKATEKVFLERFVHCFEEESSQLLKLYKENRSIPT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00537 374 Gene3D Transcription termination factor 3, mitochondrial 166 365 IPR038538 -
Car01g00537 374 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 370 - -
Car01g00537 374 PANTHER CGI-12 PROTEIN-RELATED 21 370 IPR003690 GO:0003690|GO:0006355
Car01g00537 374 Pfam mTERF 77 228 IPR003690 GO:0003690|GO:0006355
Car01g00537 374 Pfam mTERF 180 337 IPR003690 GO:0003690|GO:0006355
Car01g00537 374 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Car01g00537 374 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Car01g00537 374 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Car01g00537 374 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00537 Car-Chr1 4325402 4328502 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g00537 mTERF 3.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00537 K15032 - gmx:102663105 407.142