Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00510 ATGAGGAGGAATTGCAACTTGGAACTTTGCCTTTTCCCTCCCTACCATACTTCTGCCAATCGCCACAACCAATGCAatttGGTAGAAGAAGAGGATCATAGTGATAAGAGGCTAACAACGCAAAATCAGCAACAACCGCTAACAATTTTCTATGATGGCAAGATTTGTGTTACTGATGTCACCGAGTTTCAGGCCAAATCCATCTTAATGATGGCAAATAAAAAGCTACAAGAAAGTGTGAATACACCAACACCAAGAGGGTCAGAACCATCAACACCAACAATAGTGTATTCTCCTAATCAATTGTATAGCCCAGCAGGCCTAGGCCCAGGCCCACGCCTTTCAATGAAAAGATGTTTGCAGCGGTTTCTACAAAAGAGAAAAAATCGGGTCCTAGAAGCATCTCCATACAATCACTAG 420 0.4238 MRRNCNLELCLFPPYHTSANRHNQCNLVEEEDHSDKRLTTQNQQQPLTIFYDGKICVTDVTEFQAKSILMMANKKLQESVNTPTPRGSEPSTPTIVYSPNQLYSPAGLGPGPRLSMKRCLQRFLQKRKNRVLEASPYNH 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00510 139 ProSiteProfiles Tify domain profile. 40 74 IPR010399 -
Car01g00510 139 MobiDBLite consensus disorder prediction 78 109 - -
Car01g00510 139 Pfam tify domain 43 73 IPR010399 -
Car01g00510 139 SMART tify_2 40 74 IPR010399 -
Car01g00510 139 PANTHER - 1 139 - -
Car01g00510 139 Pfam Jas motif 117 137 IPR018467 -
Car01g00510 139 MobiDBLite consensus disorder prediction 78 101 - -
Car01g00510 139 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 139 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00510 Car-Chr1 4070808 4073279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00510 1 138 Tify Gene Family AT1G30135 35.971 5.15e-22 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car01g00510 tify 9.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00510 - - gmx:100803886 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00510 01 4070808 4073279 Car01g00510 01 4070808 4073279 ECH