Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00502 ATGGAGGATGAGATTGAAGCACAAGCATGTAAGTTTCCAAGGCTTGGAAATGGTTCTTCAAATAACAAAAACATAGGTAAGTATCCTCTTGATGATGAGGAACAAGAGCTTATTATTAGAAGGAAAAATGTTAGAGAAATTGGAAGAATTGATGATGTCAATGTTAACACAAGAAACCATTTCCAAAACCATTCATCAAGAATTGTTAGAGTGTCTAAAGCATCTGGTGGAAAAGATAGACACAGCAAAGTAATGACTTCAAAGGGTTTAAGAGACAGAAGAGTTAGGCTGTCAGTTACAACAGCTATTCAATTCTATGATCTTCAAGATCGTCTTGGTTATGATCAACCTAGTAAAGCTGTTGAATGGTTAATCAATGCTGCTTCTGATTCCATCTCTGAACTACCTTCTCTCAACATCAACACTTTCCCTCAAACCCCAACTCATGAAAGACAGAACAACAACAACAACCTTAATTCTTTGTCTAAATCTGCTTGTAGCAGCACTTCTGAGACAAGTAAAGGTTCTGAGAGAGCAAAGGAGAAAGATAATGAGTCTAGTTTTGCacaacaacaacaacaacagcaacatcatcaTGATGTGAGTGTGAATCATAATCATCACATTTCTCAAACTGCTTCATTTACTGAGTTACTGACTGGTGGAATTGGTAGTAGTAATGTAAGAATTCCAACAACAACTAGTCCTAATGGATCAGTTCATGATTCTCAGATTAATAATCATGGTGATGAGTTCAACAAAACAAGACATCATCAACAATGGTCTTCAACAGTAACACCAATAATGGATTATTTCAACTCAGGACTTATGGTGTCAAATTCAAGAACtcatcatcataatcaatcttctacttcatcatcatcatcttcTGGTTGTTTCCAACTAGGACAACAACATTCACTACCAGTTTCACCATTCAGTAATAGTGGTGAAAACAACTCAGATATTCAAATGCAGCAGCATTTTCCATTCATGTCTGAACATCTTATGCAGCAACAAGCTGTGGTTACTTCATCATCATCTTCACATCAAGCAAGTGGGAATAATGATCATCATTACAATCTTAACTTCGCTATATCGTCTTCGGGCCTTGTTGGTTACAATAGGGGGACCCTTCAGTCCAATTCACAGTCTCTTTTGCATCAGTTGCAGAGGTTTTCACCTATGGATGGATCATCAACAACATCATCATCCAATAATCTACCTTTCTTCATGGGAGCTACTGTTACTCCTGCTGTTCCTTCAACAATGGACAACAACCATCAACACCTTCCATTTTCACCTGTCTTTGATGCTCGTTTGCAGCTTTGCTACACTGATGGAAGCCGCCATTCAGATCAAAAGGGAAAATGCAATAAGAACTGA 1386 0.3593 MEDEIEAQACKFPRLGNGSSNNKNIGKYPLDDEEQELIIRRKNVREIGRIDDVNVNTRNHFQNHSSRIVRVSKASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLINAASDSISELPSLNINTFPQTPTHERQNNNNNLNSLSKSACSSTSETSKGSERAKEKDNESSFAQQQQQQQHHHDVSVNHNHHISQTASFTELLTGGIGSSNVRIPTTTSPNGSVHDSQINNHGDEFNKTRHHQQWSSTVTPIMDYFNSGLMVSNSRTHHHNQSSTSSSSSSGCFQLGQQHSLPVSPFSNSGENNSDIQMQQHFPFMSEHLMQQQAVVTSSSSSHQASGNNDHHYNLNFAISSSGLVGYNRGTLQSNSQSLLHQLQRFSPMDGSSTTSSSNNLPFFMGATVTPAVPSTMDNNHQHLPFSPVFDARLQLCYTDGSRHSDQKGKCNKN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00502 461 MobiDBLite consensus disorder prediction 140 173 - -
Car01g00502 461 MobiDBLite consensus disorder prediction 226 261 - -
Car01g00502 461 MobiDBLite consensus disorder prediction 281 302 - -
Car01g00502 461 MobiDBLite consensus disorder prediction 226 246 - -
Car01g00502 461 ProSiteProfiles TCP domain profile. 77 135 IPR017887 -
Car01g00502 461 MobiDBLite consensus disorder prediction 140 202 - -
Car01g00502 461 PANTHER TRANSCRIPTION FACTOR TCP24 2 458 - -
Car01g00502 461 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 458 IPR005333 GO:0003700
Car01g00502 461 Pfam TCP family transcription factor 76 202 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00502 Car-Chr1 3998414 4004384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00502 55 457 TCP Transcription Factor Family AT4G18390 37.892 4.83e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car01g00502 TCP 2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00502 - - cam:101507434 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00502 01 3998414 4004384 Car01g00502 01 3998414 4004384 ECH