Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00500 ATGTTAGAGAGTGGTAGTGGTCGTGATTCTGGAATGAGCTTAGAAACAGTTAATTCCACAACGCAACGAACTTCCATGAGCAGCGGTAGTGAAAGCATTTGCAGCACAAGTTTCAGCCGTCTCTCCTTCGACCTCCTTCCAATTTCCTCACCGGAGAGTCTCTCTATCAAACCTCATCGCTCCTCCGATTTCGCCTACACCGCCATCAGAAAATCCTCCCTCACCTTCCGCGACTTCCACCTTCTCCGCCGTATAGGCTCTGGCGACATCGGCACCGTTTACCTCTGTCGCCTCCGTGACTCCGACGACGACGACCCTGCCTCCTACTACGCTATGAAGGTCGTTGACAAAGACGCTGTTGCAATCAAGAAGAAATCACATAGAGCCGAAATGGAGAGAAAGATTCTGAAGATGCTTGATCATCCTTTTCTCCCTAGTCTTTACGCAGAATTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAGTTTTGCTCCGGCGGAGATTTACACTCTCTCCGTCACCGCCACCACCGTAACCGCTTCTCTCTCTCCTCCGCAAGGTTTTACGCGGCTGAAGTCTTGGTGGCATTGGAATACCTTCACATGTTAGGAATCATCTACAGAGATCTAAAGCCGGAAAATGTGTTAGTCAGATCAGACGGTCACATCATGCTCTCTGATTTTGATCTATCTATGTGTTCTCACGCAATCCCATCCGTTGAATCATCTCCAGATTGTTTCCCCAAAGATGAAGCACTTGATGTATCATGCACCCGCCCGCATTCCAACTTAACTCCATTCGCGTGTCTCTCGAAGCGGCTTTTCCGGTCCAGAAAAGTGCAAACCTTTCAGTCGAACCGGCTTTTCGTAGCTGAACCGGTTGAGGCACGGTCTTGTTCATTCGTTGGAACTCACGAATACGTATCCCCTGAAGTGGCCTCCGGGAAATCCCACGGAAACGCAGTGGATTGGTGGTCGTTTGGGATTTTCATCTATGAGATGGTGTACGGTAGAACACCGTTCGCGGGTCCATCTAATGAAGCTACGCTGCGTAACATTATAAAAAAACCTCTTAGTTTTCCTACAGCTACGCCTTCTAGTACGCTTGAAATGCACGCGCGGAACCTCGTGTCTGGATTGCTTAATAAAGACCCGAACCGTAGACTCGGGTCGAAGCGAGGAGCTGCTGACGTCAAGATGCATCCGTTTTTCGTGGGGCTAAATTTGGCGCTGATACGGATGGTTACTCCGCCGGAGGTTCCTGGATTAAGAAGACACAAAACGACGCCGTTATTCACCGTGAAAGATAATAACGGCAAAAGAAGTTGTAGTTCTAGTAGACAGCAACACACTACGTCGTCGTTTGATTACTTTTGA 1377 0.4851 MLESGSGRDSGMSLETVNSTTQRTSMSSGSESICSTSFSRLSFDLLPISSPESLSIKPHRSSDFAYTAIRKSSLTFRDFHLLRRIGSGDIGTVYLCRLRDSDDDDPASYYAMKVVDKDAVAIKKKSHRAEMERKILKMLDHPFLPSLYAEFEASHFSCIVMEFCSGGDLHSLRHRHHRNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSMCSHAIPSVESSPDCFPKDEALDVSCTRPHSNLTPFACLSKRLFRSRKVQTFQSNRLFVAEPVEARSCSFVGTHEYVSPEVASGKSHGNAVDWWSFGIFIYEMVYGRTPFAGPSNEATLRNIIKKPLSFPTATPSSTLEMHARNLVSGLLNKDPNRRLGSKRGAADVKMHPFFVGLNLALIRMVTPPEVPGLRRHKTTPLFTVKDNNGKRSCSSSRQQHTTSSFDYF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00500 458 Gene3D Transferase(Phosphotransferase) domain 1 296 422 - -
Car01g00500 458 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 457 - -
Car01g00500 458 Gene3D Phosphorylase Kinase; domain 1 77 163 - -
Car01g00500 458 MobiDBLite consensus disorder prediction 9 31 - -
Car01g00500 458 PANTHER FLIPPASE KINASE 1-RELATED 1 457 - -
Car01g00500 458 SUPERFAMILY Protein kinase-like (PK-like) 57 425 IPR011009 -
Car01g00500 458 Gene3D Transferase(Phosphotransferase) domain 1 164 232 - -
Car01g00500 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Car01g00500 458 ProSiteProfiles Protein kinase domain profile. 79 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00500 458 MobiDBLite consensus disorder prediction 433 458 - -
Car01g00500 458 Pfam Protein kinase domain 79 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00500 458 Pfam Protein kinase domain 298 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00500 458 MobiDBLite consensus disorder prediction 1 31 - -
Car01g00500 458 SMART serkin_6 79 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00500 Car-Chr1 3953007 3954762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00500 9 458 AGC Kinase Gene Family AT2G34650 65.570 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car01g00500 Pkinase 3.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00500 - - gmx:100795536 663.685