Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00472 ATGGCAATCAAAAACATCATTTCCATAACATGTCTATTCCTCCTCCTTCTTCCATTAATCTCTTGCACCAAAAACAAACAGATTTATCTAGTTGAGTTTAAAGAGAACACAAATGAAGATAAAACATTGCATGAAATAGAGAATACACATCACTCTTATTTGCATTTGGTGAAAGAAACTGAGGAAGAAGCCAGAGCTTCACTTCTTTATAGTTACAAACACACTTTCAATGGCTTTGCAGCATTGCTTACACCAAATGAAGCCAATAATCTCTCAGGAATGGAAGGAGTGGTCTCTGTGCATAAGAGCCAGAGAAGGATCTACTCAATGCATACAACAAGGTCTTGGAAGTTTGTGGGGTTAGATGGACCATTAGATCCTTTTTTTGATGAAAAATCCAATGAGACAAATAGAGACATTTTAGCCAAAGCAAAACATGGAGAAGATATTATAGTAGGAATGGTTGATAGTGGTGTGTGGCCAGACTCAAAGAGCTTCAGTGATGAAGGGATGGGTCCTGTTCCACAGAAATGGAAAGGGGTGTGCCAAAGTGGAACTCATTTTAGTTCATCTAAATGCAATAGAAAGATAATTGGAGCTAGGTACTATTTGCAAGGTTATGAAAGTATATATGGACCTCTAGATGAAGAGGAGGATTACAAATCTGCTCGCGACAAAGACGGCCACGGAACACACACATCTTCAATAGTTGCAGGGCGAGCTGTTGCAAATGCATCTGCACTTGGAGGCTTCGCCAGTGGCACAGCTTCTGGCGGAGCCCCTTTAGCTCGCCTTGCAATATACAAAGCATGTTGGCCATTTAAAGGAAAATCGAAAAGCGATGGAAATATTTGTACAGATATTGATTTGCTTAAAGCTATAGATGATGCTATTAATGATGGTGTTGATGTTTTAAGTCTTTCCATTGGGTTTCATGAGCCATTGACATATGATGAAGATGTTATTGCCAAAGGTTCATTACAAGCTATAAAGAACAACATTGTTGTTGTTTGTAGTGCTGGAAATGCTGGTCCTTTTCCTCATACTTTGTCAAACCCTGCTCCTTGGATCATCACTGTTGGTGCTAGTACTGTTGATCGCACATTTCTTGCTCCAGTTAAGCTCACCAATGGTACAATCATTGAGGGTCGATCAATTACACCACTCCTCATAGAAAATAGTTTCCGTCCATTAGTCTTTGCAAGTGATGTTGAAAATCCAAGTGTACCAAGTGCAAATTCTAGTTATTGCCTTGACAATACCCTTGACCCAAGCAAGGTAAAGGGGAAGATAGTGCTATGCATGAGAGGGCAAGGTACTAGAATGAAAAAAGGGTTGGAAGTTCAAAGGGCTGGTGGTGTTGGTTTGATCCTTGGGAACAATAAATTATATGGAAATGACCTACCTTCTGATCCTCATTTCATTTCAGCCACTGGAGTGAACTATGACAATACCTTGAAACTTATTCAATATATTCATTCTTCCCCTAATCCAATGGCACAACTTTTACCTGGAACAACAGTGTTAGATTCCAAACCAGCACCCTCTATGGCTGTCTTCACTAGCAGAGGTCCTAATATAATTGACCCTAATATTCTAAAGCCTGACATAACAGCTCCTGGAGTAGACATATTGGCAGCATGGACAGCTAAAGATGGTCCTACAAGAATGACATTCAATGATAAACGAGTTGTTAagtacaatatcttttcaggaacttcaatggcttgccctcatgtttctgcagctgctgttcttctcaaagccatgtaccctacttggagtcctgctgctataagatctgccatcatgacttcagCAAGGGCAAATGACAACACAGGAAAACCAATTACTGATGAAACAGGAAAACCAACAACACCTTTTGCAATGGGTTCTGGCCATTTCCACCCCAAAAGAGCAACAAATCCTGGACTTGTTTATGATGCTTCCTACACGGACTATCTTCTTTACCTTTGTAATCTCAAAACAACTCAAAACTTAAACCTTTCATATAACTGTCCAAATCCACTTCCTGAACCATTTGATCTCAACTATCCATCAATACAAATTCATAAACTCAATTACACTAAAACTATACAAAGAACAGTGACCAATGTTGGTAGGAACGAAAGTGTTTACAAGTTTATTGCTAAGCCACCTAAGGAATTCAACATTATAGCTTTTCCAAGCAAATTGAAATTTACACATTTGGGGCAGAAAAGGGAATTTACCATCACAGTGACAGAAAATAAAGATCATATACGAACCAAAAGTGATTCTGAGAAGTACTATTTTGGATGGTATACTTGGACTGACAGACGTCATGTTGTAAAAAGTCCAGTGGCAGTGTCTTTTCAATAG 2361 0.3693 MAIKNIISITCLFLLLLPLISCTKNKQIYLVEFKENTNEDKTLHEIENTHHSYLHLVKETEEEARASLLYSYKHTFNGFAALLTPNEANNLSGMEGVVSVHKSQRRIYSMHTTRSWKFVGLDGPLDPFFDEKSNETNRDILAKAKHGEDIIVGMVDSGVWPDSKSFSDEGMGPVPQKWKGVCQSGTHFSSSKCNRKIIGARYYLQGYESIYGPLDEEEDYKSARDKDGHGTHTSSIVAGRAVANASALGGFASGTASGGAPLARLAIYKACWPFKGKSKSDGNICTDIDLLKAIDDAINDGVDVLSLSIGFHEPLTYDEDVIAKGSLQAIKNNIVVVCSAGNAGPFPHTLSNPAPWIITVGASTVDRTFLAPVKLTNGTIIEGRSITPLLIENSFRPLVFASDVENPSVPSANSSYCLDNTLDPSKVKGKIVLCMRGQGTRMKKGLEVQRAGGVGLILGNNKLYGNDLPSDPHFISATGVNYDNTLKLIQYIHSSPNPMAQLLPGTTVLDSKPAPSMAVFTSRGPNIIDPNILKPDITAPGVDILAAWTAKDGPTRMTFNDKRVVKYNIFSGTSMACPHVSAAAVLLKAMYPTWSPAAIRSAIMTSARANDNTGKPITDETGKPTTPFAMGSGHFHPKRATNPGLVYDASYTDYLLYLCNLKTTQNLNLSYNCPNPLPEPFDLNYPSIQIHKLNYTKTIQRTVTNVGRNESVYKFIAKPPKEFNIIAFPSKLKFTHLGQKREFTITVTENKDHIRTKSDSEKYYFGWYTWTDRRHVVKSPVAVSFQ 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00472 786 SUPERFAMILY PA domain 424 555 IPR046450 -
Car01g00472 786 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 23 783 - -
Car01g00472 786 SUPERFAMILY Subtilisin-like 136 642 IPR036852 GO:0004252|GO:0006508
Car01g00472 786 Gene3D - 658 785 - -
Car01g00472 786 CDD Peptidases_S8_3 108 607 IPR034197 -
Car01g00472 786 Pfam Subtilase family 147 631 IPR000209 GO:0006508|GO:0008236
Car01g00472 786 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Car01g00472 786 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Car01g00472 786 PRINTS Subtilisin serine protease family (S8) signature 571 587 IPR015500 -
Car01g00472 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 572 582 IPR023828 -
Car01g00472 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Car01g00472 786 CDD PA_subtilisin_like 373 500 - -
Car01g00472 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 783 IPR045051 -
Car01g00472 786 Pfam PA domain 415 486 IPR003137 -
Car01g00472 786 ProSiteProfiles Serine proteases, subtilase domain profile. 115 641 - -
Car01g00472 786 Gene3D Peptidase S8/S53 domain 149 654 IPR036852 GO:0004252|GO:0006508
Car01g00472 786 Gene3D - 366 509 - -
Car01g00472 786 Pfam Fibronectin type-III domain 682 783 IPR041469 -
Car01g00472 786 Pfam Peptidase inhibitor I9 29 105 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00472 Car-Chr1 3701072 3708059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00472 21 785 Subtilisin-like Serine Gene Family AT5G45650 54.768 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00472 - - gmx:100793064 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00472 01 3701072 3708059 Car01g00472 01 3701072 3708059 ECH