Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00466 ATGGAATCGAAAAACACAGCTAGATTTAAGCTTGGGAAGCAATCATCGCTAGCACCAGAACGCCATAGTGAAGAAACAGAGGTGCAAAACAATGGTGATGGTGGTATTGATCCTGGAGTGAGGTTGATGTATTCAGCAAACGAAGGTGATGTTGATGGTATACGCGAGGTGTTGGAATCAGGTGTGAGTGCGAATTTTAGGGATGGTGATGGACGCACTGCTCTTCATATTGCTGCTTGTCAAGGTTTTACTCATGTTGTTGCTTTGTTGCTCGAAAAAGGTGCTGATGTTGATCCTAAAGATCGATGGGGTAGCACGCCCCTTGCAGATGCGATATATTATAAAAACAATGACGTGATCAAACTTTTGGAGAATCATGGAGCAAAGCCTTTGATGGCCCCTATGCATGTTAATCATGCACGTGAAGTCCCAGAATATGAAATCAATCCCAAAGAACTTGATTTTACCCACAGTGTGGAGATAACGAAGGGGACTTTCTGTAGTGCATTGTGGCGTGGGACTGAGGTTGCGGTAAAAAAGCTTGGAGAGAATTTGATTAGTGACGAGGAGAAAGTGAAGGCTTTCAGAGATGAGCTTGCCCTGTTCCAGAAGATTCGGCATCCAAATGTAGTCCAATTTCTTGGTGCTGTGACACAGAGTAGTCCAATGATGATTGTGACTGAATATCTTCCCAAGGGAGATCTTCGTGATTTCATGAAAAGAAAAGGAGCTTTGAAACCAAGTACAGCTGTGAGATTTGCACTTGATATTGCTAGGGGAGTGGGTTATTTGCATGAAAATAAACCATCGCCAATTATTCACCGTGATCTTGAGCCTTCTAATATATTGCGGGATGATTCTGGGCACCTAAAAGTTGCGGACTTTGGAGTTAGCAAGTTGCTAGCAGTTAAAGAAGACAGGCCTCTAACTTGCCAAGATACTTCATGCCGCTATGTGGCTCCTGAGGTTTTTAAACATGAAGAATATGACACCAAAGTGGATGTGTTCTCATTTGCACTAATTCTACAAGAGATGATTGAAGGCTGCCCTCCTTTTTCTGCAAAGCACGATGATGAGGTTCCTAAGGTATATGCTGCAAAAGAGCGGCCACCCTTCAATGCTCCCGCCAAGCGTTATTCTCATGGAATTCGAGAGTTGATTGATGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACATTCAGACTAATAATAACAAGGCTAGAGTCCATCTACAATACAATTGGTCAAAAACGACGTTGGAAGGTTAGACCATTGAGGTGCTTTCAGAATCTGGAAGCCTTGTTGAAGAGAGATCGTTCGAAATTAAGCAGTCGGGGCGGATCATCTCGCTCCACTTCCAGCCATAAATGA 1374 0.4352 MESKNTARFKLGKQSSLAPERHSEETEVQNNGDGGIDPGVRLMYSANEGDVDGIREVLESGVSANFRDGDGRTALHIAACQGFTHVVALLLEKGADVDPKDRWGSTPLADAIYYKNNDVIKLLENHGAKPLMAPMHVNHAREVPEYEINPKELDFTHSVEITKGTFCSALWRGTEVAVKKLGENLISDEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRDFMKRKGALKPSTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDRPLTCQDTSCRYVAPEVFKHEEYDTKVDVFSFALILQEMIEGCPPFSAKHDDEVPKVYAAKERPPFNAPAKRYSHGIRELIDECWNENPAKRPTFRLIITRLESIYNTIGQKRRWKVRPLRCFQNLEALLKRDRSKLSSRGGSSRSTSSHK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00466 457 MobiDBLite consensus disorder prediction 1 37 - -
Car01g00466 457 Gene3D Transferase(Phosphotransferase) domain 1 231 447 - -
Car01g00466 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 439 - -
Car01g00466 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Car01g00466 457 Pfam Protein tyrosine and serine/threonine kinase 171 408 IPR001245 GO:0004672|GO:0006468
Car01g00466 457 Gene3D - 3 146 IPR036770 -
Car01g00466 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Car01g00466 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
Car01g00466 457 PRINTS Tyrosine kinase catalytic domain signature 227 240 IPR001245 GO:0004672|GO:0006468
Car01g00466 457 PRINTS Tyrosine kinase catalytic domain signature 266 284 IPR001245 GO:0004672|GO:0006468
Car01g00466 457 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Car01g00466 457 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 439 - -
Car01g00466 457 PIRSF ILK 1 431 - -
Car01g00466 457 SMART ANK_2a 70 99 IPR002110 GO:0005515
Car01g00466 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Car01g00466 457 Gene3D Phosphorylase Kinase; domain 1 147 230 - -
Car01g00466 457 SUPERFAMILY Protein kinase-like (PK-like) 156 409 IPR011009 -
Car01g00466 457 SUPERFAMILY Ankyrin repeat 41 132 IPR036770 -
Car01g00466 457 ProSiteProfiles Protein kinase domain profile. 120 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00466 457 CDD STKc_MAP3K-like 161 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00466 Car-Chr1 3617994 3624218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00466 2 429 MAP Kinase Kinase Kinase AT4G18950 67.824 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Car01g00466 PK_Tyr_Ser-Thr 1.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00466 - - gmx:100790126 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00466 01 3617994 3624218 Car01g00466 01 3617994 3624218 ECH