Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00462 ATGTGGTCTTGTTGTGACCACAAGCAAGGTCTAAATCAAGCCAGATTCATTAAAGTTACGGTCTTGAAACTAGGCTGCTATAGCTTTTGGTTTGGACAAGAAAGATGGAGACAAGGTGAGAAGAATGTGCTTGTGTTTGATCTTGGTGGTGGAACTTTTGATGTTTCTTTGGTTACCATTGATGAGGGAATTTTCAAAGTTAAGGCTACATTAGGAGATACTCATTTGGGTGGTGTTGATTTTGTTAACAATTTGTTGAACGGTCTTGTTGAATTGTTTAAGAGAAAGTACAAGAAGGACTTGAACATTAGTGAAAATTCTAAAGCTTTGGGGAGGTTAAGGTTAGCATGTGAGAAAGCAAAGAGGTTACTTTCTTCAACTTCTGAGACAATTAGTTAG 399 0.3734 MWSCCDHKQGLNQARFIKVTVLKLGCYSFWFGQERWRQGEKNVLVFDLGGGTFDVSLVTIDEGIFKVKATLGDTHLGGVDFVNNLLNGLVELFKRKYKKDLNISENSKALGRLRLACEKAKRLLSSTSETIS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00462 132 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 33 130 - -
Car01g00462 132 Gene3D - 36 77 - -
Car01g00462 132 Pfam Hsp70 protein 38 130 IPR013126 GO:0005524|GO:0140662
Car01g00462 132 ProSitePatterns Heat shock hsp70 proteins family signature 2. 45 58 IPR018181 -
Car01g00462 132 PANTHER HEAT SHOCK PROTEIN 70KDA 33 130 IPR013126 GO:0005524|GO:0140662
Car01g00462 132 Gene3D Actin; Chain A, domain 4 78 130 - -
Car01g00462 132 SUPERFAMILY Actin-like ATPase domain 40 130 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00462 Car-Chr1 3596053 3597360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00462 39 130 Calmodulin-binding Proteins AT3G09440 71.739 8.38e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00462 K03283 - gmx:100788531 154.451