Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00461 ATGGAGACTGCGGAAAAGTGTTTGGTTGATGCAAAGATTAGTAAAAGACAAGTTGACGAGTTTGTTCTTGTTGGAGGGTCAACTAGAATTCCAAAGATTCAACAACTATTGAAAGAAATGTTCAAAGTCAACGGTGAAGTCAAAGAGCCATGTAAAAGCATTAATCCCGATGAAGCTGTGGCTTATGGTGCAGCTGATCAAGCAGCAATATTGAATGATGAAGGAGACAAGAAAAAGAGTTGTTGTTGTTGGATGTTATGCCTCTTAGTCTTGGTGTTGAAACTGCTGATAATGTTATGTCTGTTTTGA 309 0.3819 METAEKCLVDAKISKRQVDEFVLVGGSTRIPKIQQLLKEMFKVNGEVKEPCKSINPDEAVAYGAADQAAILNDEGDKKKSCCCWMLCLLVLVLKLLIMLCLF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00461 102 Gene3D - 52 69 - -
Car01g00461 102 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 1 80 - -
Car01g00461 102 Gene3D - 1 51 - -
Car01g00461 102 PANTHER HEAT SHOCK PROTEIN 70KDA 1 80 IPR013126 GO:0005524|GO:0140662
Car01g00461 102 Pfam Hsp70 protein 2 76 IPR013126 GO:0005524|GO:0140662
Car01g00461 102 SUPERFAMILY Actin-like ATPase domain 2 71 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00461 Car-Chr1 3595653 3595961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00461 1 78 Calmodulin-binding Proteins AT5G02490 70.513 5.68e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00461 K03283 - lja:Lj0g3v0265679.1 123.25