Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00460 ATGATCCCTACAAAAAAGGACAGTTTTTTCTCTACATTCTTTCATAGTAATCAAGATAGTGTTTTGATTAAAGTGTATGAAGGAGAAGAAGCTAATACTGAGGATAACTTTTTTCTTGGGAAATTTGAGCTTTCAGGTTTCTCTAAAAGGGTTCCAAATATTAATGTTTGTTTTGATGTTGATGGTATTTTGGAGGTTACTGCTGAAGATAAGGCAAAAGGGCTGAAAAAGAAGATTACTATTAGTAACAAGGATGGAAGGTTGAGTTCTGAAGAGATGAGGAGGATGGTGATAGCTGCTGAGATGTATAAGGTAGCGGATGAGGAGGTGAAAAAGAAGGTGAAGGTAAAGAAATTGTTTGAGAATTATGTTTATGAAATGAGGGAGAGAGTTAAGAAGCTTGAGAAGGTAGTGGAAGAAACTATGGAATGGCTTGATAGAAACCAATTGGCTGAAATTGATGAGTTTGAATTCAAGAAGCAGGAATTGGAAAAGAATATGCAGTTTATCTCATTTTGA 519 0.3507 MIPTKKDSFFSTFFHSNQDSVLIKVYEGEEANTEDNFFLGKFELSGFSKRVPNINVCFDVDGILEVTAEDKAKGLKKKITISNKDGRLSSEEMRRMVIAAEMYKVADEEVKKKVKVKKLFENYVYEMRERVKKLEKVVEETMEWLDRNQLAEIDEFEFKKQELEKNMQFISF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00460 172 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 117 IPR029047 -
Car01g00460 172 PANTHER HEAT SHOCK PROTEIN 70KDA 1 161 IPR013126 GO:0005524|GO:0140662
Car01g00460 172 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 117 170 IPR029048 -
Car01g00460 172 Gene3D - 88 171 IPR029048 -
Car01g00460 172 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 86 IPR029047 -
Car01g00460 172 Pfam Hsp70 protein 2 168 IPR013126 GO:0005524|GO:0140662
Car01g00460 172 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00460 Car-Chr1 3595120 3595638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g00460 2 164 Calmodulin-binding Proteins AT1G16030 52.747 3.01e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00460 K03283 - gmx:100788531 207.994